Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00766 and BPUM_0418
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:32
# Commandline: needle
# -asequence pep-align/BSNT_00766___dctR.1.24716.seq
# -bsequence pep-align/BPUM_0418___dctR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00766___dctR-BPUM_0418___dctR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00766___dctR-BPUM_0418___dctR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00766___dctR
# 2: BPUM_0418___dctR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity: 149/229 (65.1%)
# Similarity: 178/229 (77.7%)
# Gaps: 5/229 ( 2.2%)
# Score: 740.5
#
#
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BSNT_00766___ 1 MARKEWKVLLIEDDPMVQEVNKDFITTVKGVTVCATAGNGEEGMKLIKEE 50
..:.||||||||||||||||:||.:|.|..|.|.|||||:|::||||.
BPUM_0418___d 1 --MTQIKVLLIEDDPMVQEVNKEFIKSVPGFQVVAIAGNGEQGIQLIKEI 48
BSNT_00766___ 51 QPDLVILDVYMPKKDGIKTLQEIRKQKLEVDVIVVSAAKDKETISLMLQN 100
:||||:||||||||||:||||:|||||::|||||:|||||||||..||||
BPUM_0418___d 49 RPDLVVLDVYMPKKDGMKTLQDIRKQKIQVDVIVISAAKDKETIGTMLQN 98
BSNT_00766___ 101 GAIDYILKPFKLERMRQALEKYKQYKQKIEANDTLSQEQLDAILNIPQQA 150
||.|||:||||.|||:::||.||.:|.||......|||.||.|:..|...
BPUM_0418___d 99 GARDYIIKPFKFERMKESLETYKAFKSKIRTAAEFSQEMLDDIIRKPAVK 148
BSNT_00766___ 151 VQD--LPKGLNHFTMNEVTAFLKQQTASLSAEEVAKALGIARVTARRYLD 198
.:| ||||||..||||:.|::..|....||||||.||||||||||||||
BPUM_0418___d 149 QEDTWLPKGLNVHTMNEIKAYMGLQEGPQSAEEVANALGIARVTARRYLD 198
BSNT_00766___ 199 YLEKTGIIKLDVQYGGVGRPVNRYVLKG- 226
:|.|.|.:|||:||||||||||:|::..
BPUM_0418___d 199 FLVKEGELKLDMQYGGVGRPVNKYIVHSD 227
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