Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00757 and BPUM_0415

See DNA alignment / Visit BSNT_00757 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:31
# Commandline: needle
#    -asequence pep-align/BSNT_00757___ydbA.1.24716.seq
#    -bsequence pep-align/BPUM_0415___ydbA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00757___ydbA-BPUM_0415___ydbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00757___ydbA-BPUM_0415___ydbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00757___ydbA
# 2: BPUM_0415___ydbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 278
# Identity:     196/278 (70.5%)
# Similarity:   230/278 (82.7%)
# Gaps:           8/278 ( 2.9%)
# Score: 1017.0
# 
#
#=======================================

BSNT_00757___      1 MPTERKEDLHQQLKEIEKWEKDQQKVWFWEKLSRLPFQLLDKLTPEFIQK     50
                       .|.:|.|..|||||||||||||||||||||||||||:||||||.||||
BPUM_0415___y      1 --MEEREWLKAQLKEIEKWEKDQQKVWFWEKLSRLPFQMLDKLTPAFIQK     48

BSNT_00757___     51 KIGKLLDEVGSFVQTGGQYLTSEKQIIRMFQKKLPEEIFESLEDIRKAPL    100
                     |||.||||:|.::|:||.||||||.||..||||..::..:.:|||.|||:
BPUM_0415___y     49 KIGVLLDEMGHYIQSGGAYLTSEKGIIHQFQKKCADDSIQRIEDIEKAPI     98

BSNT_00757___    101 PVMDEIAEGMGKNRTNAATVQGATTGVGGVFTLAADIPAVLGLSLKTLQD    150
                     .:||.|:|.|||||||.||||||||||||:||||||||||||||||||||
BPUM_0415___y     99 EIMDAISEHMGKNRTNLATVQGATTGVGGMFTLAADIPAVLGLSLKTLQD    148

BSNT_00757___    151 IAVAYGYDPKEKKERVFIVKCLQLTSADVVGKRSILQELKHY-DQDRTYK    199
                     |||.||||||.|:|||||:|||||||||||||:|||:||:.: |.:..::
BPUM_0415___y    149 IAVTYGYDPKNKEERVFIIKCLQLTSADVVGKKSILKELRSFHDSEGKHE    198

BSNT_00757___    200 NVASQIQGWREVVLGYRDTFGWKKLFQMVPVAGMVFGAAANRSTLNDITE    249
                     |:.||||||||||..|||:||||||||:|||||::|||.:|||.|..|.|
BPUM_0415___y    199 NMFSQIQGWREVVYNYRDSFGWKKLFQLVPVAGILFGAVSNRSQLKSIAE    248

BSNT_00757___    250 TGMMLYKKRRILERLKE-TEREME----    272
                     ||||.|:||||:.||:| |::|..    
BPUM_0415___y    249 TGMMQYRKRRIVSRLEEITQQEQSESGA    276


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