Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00741 and BPUM_0400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:31
# Commandline: needle
# -asequence pep-align/BSNT_00741___topB.1.24716.seq
# -bsequence pep-align/BPUM_0400___topB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00741___topB-BPUM_0400___topB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00741___topB-BPUM_0400___topB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00741___topB
# 2: BPUM_0400___topB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 729
# Identity: 575/729 (78.9%)
# Similarity: 648/729 (88.9%)
# Gaps: 3/729 ( 0.4%)
# Score: 2999.0
#
#
#=======================================
BSNT_00741___ 1 MSKTVVLAEKPSVGRDLARVLKCHKKGNGYLEGDQYIVTWALGHLVTLAD 50
|||||||||||||||||||||||||||||:||||||||||||||||||||
BPUM_0400___t 1 MSKTVVLAEKPSVGRDLARVLKCHKKGNGFLEGDQYIVTWALGHLVTLAD 50
BSNT_00741___ 51 PEGYGKEFQSWRLEDLPIIPEPLKLVVIKKTGKQFNAVKSQLTRKDVNQI 100
|||||||||||||||||||||||||||:|||||||.|||:||.||||..|
BPUM_0400___t 51 PEGYGKEFQSWRLEDLPIIPEPLKLVVMKKTGKQFQAVKAQLARKDVKDI 100
BSNT_00741___ 101 VIATDAGREGELVARWIIEKANVRKPIKRLWISSVTDKAIKEGFQKLRSG 150
|||||||||||||||||:|||:|:||:|||||||||||||:|||::|:.|
BPUM_0400___t 101 VIATDAGREGELVARWILEKAHVKKPLKRLWISSVTDKAIQEGFKRLKDG 150
BSNT_00741___ 151 KEYENLYHSAVARAEADWIVGINATRALTTKFNAQLSCGRVQTPTLAMIA 200
|||:|||.|||||||||||||||||||||||||||||||||||||:|||.
BPUM_0400___t 151 KEYDNLYRSAVARAEADWIVGINATRALTTKFNAQLSCGRVQTPTIAMIF 200
BSNT_00741___ 201 KREADIQAFTPVPYYGIRAVVDGMTLTWQDKKSKQTRTFNQDVTSRLLKN 250
|||.|||.|.|.|:||:.|.|||:||||||.|:||.|||.::|....|..
BPUM_0400___t 201 KREEDIQQFQPKPFYGLTAQVDGLTLTWQDAKTKQNRTFQENVIKERLAA 250
BSNT_00741___ 251 LQGKQAVVAELKKTAKKSFAPALYDLTELQRDAHKRFGFSAKETLSVLQK 300
.:||.|||..|||||||:|||.||||||||||||||:|||||||||.||:
BPUM_0400___t 251 CKGKPAVVDALKKTAKKAFAPGLYDLTELQRDAHKRYGFSAKETLSTLQR 300
BSNT_00741___ 301 LYEQHKLVTYPRTDSRFLSSDIIPTLKDRLEGMEVKPYAQYVSQIKKRGI 350
|||||||||||||||||:|:||:|||||||:||.|:||||:|::|.:.|:
BPUM_0400___t 301 LYEQHKLVTYPRTDSRFISADIVPTLKDRLKGMNVRPYAQHVNRILQSGV 350
BSNT_00741___ 351 KSHKGYVNDAKVSDHHAIIPTEEPLVLSSLSDKERKLYDLIAKRFLAVLM 400
|:|||:|||||||||||||||||.|....|||||||||||||||||||||
BPUM_0400___t 351 KAHKGFVNDAKVSDHHAIIPTEEELYPGVLSDKERKLYDLIAKRFLAVLM 400
BSNT_00741___ 401 PAFEYEETKVIAEIGGETFRAKGKTVQSQGWKAVYDMADEDDEQEDDRDQ 450
..||||||.||.:||.|||.|||||||:.|||||||.:.|::|.. :.||
BPUM_0400___t 401 NPFEYEETTVITKIGSETFTAKGKTVQAAGWKAVYDDSYEEEESA-EADQ 449
BSNT_00741___ 451 TLPALQKGDTLAVRTLTETSGQTKPPARFNEGTLLSAMENPSAFMQGEEK 500
.||.|.:|.:|.||.|.||.|:|||||||||.|||||||||:||||.|||
BPUM_0400___t 450 HLPLLSEGQSLDVRQLKETRGETKPPARFNEATLLSAMENPAAFMQNEEK 499
BSNT_00741___ 501 GLVKTLGETGGLGTVATRADIIEKLFNSFLIEKKGQDIFITSKGKQLLQL 550
.||||||||||||||||||||||||||||||||||:||||||||||||.|
BPUM_0400___t 500 DLVKTLGETGGLGTVATRADIIEKLFNSFLIEKKGKDIFITSKGKQLLSL 549
BSNT_00741___ 551 VPEDLKSPALTAEWEQKLSAIAAGKLKSAVFIKDMKAYAHQTVKEIKNSS 600
|||||||||||||||||||.||.|:||::.|:.:||:||.|.|.|||.::
BPUM_0400___t 550 VPEDLKSPALTAEWEQKLSKIAKGQLKASQFMSEMKSYAKQAVSEIKQTN 599
BSNT_00741___ 601 QTFRHDNITGTACPECGKMMLKVNGKRGTMLVCQDRECGSRKTIARKTNA 650
|||:|||:|||.||:|||:|||||||.||||||||||||.||.:|:||||
BPUM_0400___t 600 QTFKHDNVTGTHCPDCGKLMLKVNGKHGTMLVCQDRECGHRKNVAKKTNA 649
BSNT_00741___ 651 RCPNCHKRMELRGQGEGQTFACVCGHREKLSVFEKRKNK-DKARATKRDV 699
|||||||::||||:|:|:.||||||||||||||||||:: ::.:|:|.||
BPUM_0400___t 650 RCPNCHKKLELRGEGDGKIFACVCGHREKLSVFEKRKSQSNQKKASKHDV 699
BSNT_00741___ 700 SSYMKKQNK-DEPINNALAEQLKKLGLDK 727
|.|||||.| :||||||||||||||.||:
BPUM_0400___t 700 SKYMKKQKKVEEPINNALAEQLKKLKLDQ 728
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