Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00983 and BPUM_0397
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:39
# Commandline: needle
# -asequence pep-align/BSNT_00983___ydhC.1.24716.seq
# -bsequence pep-align/BPUM_0397___ydhC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00983___ydhC-BPUM_0397___ydhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00983___ydhC-BPUM_0397___ydhC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00983___ydhC
# 2: BPUM_0397___ydhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 224
# Identity: 117/224 (52.2%)
# Similarity: 162/224 (72.3%)
# Gaps: 0/224 ( 0.0%)
# Score: 606.0
#
#
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BSNT_00983___ 1 MDDFKLDKPTPYYLQFYNQLKKMIFNGTFKPGERINETQLAKSFGVSRSP 50
|:.|::::|.||::|||.|||:|||:|.|:||||||||||||.|||||||
BPUM_0397___y 1 MNSFEMERPAPYHMQFYEQLKQMIFDGQFQPGERINETQLAKQFGVSRSP 50
BSNT_00983___ 51 IREAMRLLEKDGLLKADDRNGFSITSLTAKDVDEIYKIRIPLEQLAVELV 100
:||||||||||.||.||.|:|:||.:|:.:||:|:|:|||.||.|||||.
BPUM_0397___y 51 VREAMRLLEKDELLIADHRSGYSIYTLSEEDVEELYQIRIALETLAVELA 100
BSNT_00983___ 101 IDEADEEELTILEKQLEETEKAIRNGTEDTEIIRLNQKFHELLVDFSHNR 150
..||.::||..:|:.|.:.::||:......:|::|::.||:.::..|||.
BPUM_0397___y 101 CKEAAQKELDEIEQVLTQADEAIKQQLPSKDIVQLHEAFHQKIILASHNH 150
BSNT_00983___ 151 HLKNLLEHVNDLIHFCRILNYTGDHRAETILREHRRIFEEVKKKNKEAAK 200
.|...|.|||.|||||||.:::|..|||||..||..|:.|:|::....|.
BPUM_0397___y 151 RLYKQLNHVNALIHFCRIFHFSGGARAETIQTEHAAIYSEMKERRSTEAV 200
BSNT_00983___ 201 QHVLAHFNHDCEHLKHVLEEGKEN 224
|.:..|..||..|||.||.|..::
BPUM_0397___y 201 QAMTNHLLHDVMHLKQVLSETNKD 224
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