Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00739 and BPUM_0396

See DNA alignment / Visit BSNT_00739 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:30
# Commandline: needle
#    -asequence pep-align/BSNT_00739___ydzA.1.24716.seq
#    -bsequence pep-align/BPUM_0396___ydzA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00739___ydzA-BPUM_0396___ydzA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00739___ydzA-BPUM_0396___ydzA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00739___ydzA
# 2: BPUM_0396___ydzA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 99
# Identity:      65/99 (65.7%)
# Similarity:    78/99 (78.8%)
# Gaps:           4/99 ( 4.0%)
# Score: 355.0
# 
#
#=======================================

BSNT_00739___      1 MLQTPIGRLRTMGFIEGMSLLILLFIAMPLKYWAGLPLAVTIVGSVHGGL     50
                      :.|.|.|||..|||||||||.||.|||||||:|.:|:|||||||:||.|
BPUM_0396___y      1 -MHTSISRLRQAGFIEGMSLLTLLLIAMPLKYFADIPMAVTIVGSLHGAL     49

BSNT_00739___     51 FILYLLVLAYATFSVKWPLKWSAAGFVAAFVPFGNFLYDRGLRKYK---     96
                     |::|:|:|||.||.|:|.||||.|||.|||:|||||.||:.||:|.   
BPUM_0396___y     50 FVIYMLILAYVTFKVRWHLKWSIAGFFAAFIPFGNFAYDKVLRQYDTKA     98


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