Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00734 and BPUM_0390

See DNA alignment / Visit BSNT_00734 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:30
# Commandline: needle
#    -asequence pep-align/BSNT_00734___ydaD.1.24716.seq
#    -bsequence pep-align/BPUM_0390___ydaD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00734___ydaD-BPUM_0390___ydaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00734___ydaD-BPUM_0390___ydaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00734___ydaD
# 2: BPUM_0390___ydaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 289
# Identity:     220/289 (76.1%)
# Similarity:   250/289 (86.5%)
# Gaps:           3/289 ( 1.0%)
# Score: 1166.0
# 
#
#=======================================

BSNT_00734___      1 --MANY-PKELPAQTQSRQPGIESEMNPSPVYEYEDYKGADKLKGKVALI     47
                       :..| ...:|.|||.:|||.|.||||:|::|.|.|:|:.|||||||||
BPUM_0390___y      1 MDLREYLTNGIPRQTQDQQPGSEREMNPAPIFEDESYQGSGKLKGKVALI     50

BSNT_00734___     48 TGGDSGIGRAVSVAYAKEGADIAIVYKDEHEDAEETKKRVEQEGVKCLLI     97
                     ||||||||||||||||||||.:||||.:||.||::|:|||||||||||.|
BPUM_0390___y     51 TGGDSGIGRAVSVAYAKEGAHVAIVYLNEHNDAKDTQKRVEQEGVKCLTI    100

BSNT_00734___     98 AGDVGEEEFCNEAVGKTVKELGGLDILVNNAGEQHPKESIKDITSEQLHR    147
                     |||||:|.||.:||.|||:..|.||||||||.||||||.|:||:|||||:
BPUM_0390___y    101 AGDVGDEAFCEKAVEKTVEAFGQLDILVNNAAEQHPKERIQDISSEQLHQ    150

BSNT_00734___    148 TFKTNFYSQFYLTKKAIDYLKPGSAIINTTSINPYVGNPTLIDYTATKGA    197
                     ||:|||||.||.||||:|||||||:||||||||||.||..||||||||||
BPUM_0390___y    151 TFRTNFYSYFYFTKKALDYLKPGSSIINTTSINPYRGNKVLIDYTATKGA    200

BSNT_00734___    198 INAFTRTMAQALVKDGIRVNAVAPGPIWTPLIPATFPEETVAQFGQDTPM    247
                     ||.|||:|||:|||||||||.||||||||||||:||.|::|..||.:|||
BPUM_0390___y    201 INGFTRSMAQSLVKDGIRVNGVAPGPIWTPLIPSTFDEDSVESFGAETPM    250

BSNT_00734___    248 GRPGQPVEHVGCYVLLASDESSYMTGQTLHVNGGNFVTT    286
                     ||||||||||||||||||||||||||||||||||:|:.|
BPUM_0390___y    251 GRPGQPVEHVGCYVLLASDESSYMTGQTLHVNGGSFMNT    289


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