Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00728 and BPUM_0388
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:30
# Commandline: needle
# -asequence pep-align/BSNT_00728___mtlR.1.24716.seq
# -bsequence pep-align/BPUM_0388___mtlR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00728___mtlR-BPUM_0388___mtlR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00728___mtlR-BPUM_0388___mtlR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00728___mtlR
# 2: BPUM_0388___mtlR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 698
# Identity: 439/698 (62.9%)
# Similarity: 560/698 (80.2%)
# Gaps: 7/698 ( 1.0%)
# Score: 2228.5
#
#
#=======================================
BSNT_00728___ 1 MYMTAREQKLLKHLLLQNRYITVTELAELMQVSTRTIHRELKSIKPLMET 50
||:||||||::|:::.||||:|:.|:||.:||||||||||||||||:::.
BPUM_0388___m 1 MYITAREQKIIKYIIQQNRYVTIREIAESVQVSTRTIHRELKSIKPILKN 50
BSNT_00728___ 51 VGLTLDKQPGKGLKAVGSPEDKQKLLTDLSYE-QHEYSADERKLLILCSL 99
..|:|||||||||||||..||||:||..:|.| |.|||:|||||||||:|
BPUM_0388___m 51 YDLSLDKQPGKGLKAVGEQEDKQRLLAHMSNEDQIEYSSDERKLLILCAL 100
BSNT_00728___ 100 LESQEPVKLYTLAHDLQVTNATVSYDLDELEKWISPFGLTLIRKRGFGIQ 149
||::|||||||||.||||||||:|||||||.:||:|:||.||||||:||:
BPUM_0388___m 101 LEAKEPVKLYTLAADLQVTNATISYDLDELTEWIAPYGLQLIRKRGYGIE 150
BSNT_00728___ 150 LIGPENAKRKIVGNLIVNRLDIQMFLEAVELNIKGKTDSSEKMFGVVSKG 199
|.|||.|||||||||||:|||||:|||.:|:|||.:|.::||:|||||:|
BPUM_0388___m 151 LKGPEEAKRKIVGNLIVDRLDIQLFLETIEMNIKHRTKATEKVFGVVSRG 200
BSNT_00728___ 200 ELLKMERILFQLKEKIAFSLSDSSYIALVVHLTYAIERIKLGETITMEQN 249
:|||:||:||.||.:::.|||||:|||||||||||||||:|||||.||:.
BPUM_0388___m 201 QLLKVERLLFHLKNRLSLSLSDSAYIALVVHLTYAIERIQLGETIRMEEE 250
BSNT_00728___ 250 ELEELKNAKESSSALEIAGELERAFGVTIPEAEVGYITIHLRSANRKYKT 299
||.|||..||..|:|.||..|||.|.|.||||||||:|||||||||.:..
BPUM_0388___m 251 ELLELKRTKEFESSLRIARALERMFNVVIPEAEVGYMTIHLRSANRSFGA 300
BSNT_00728___ 300 EYKAQEIELETALQTKRLIAFISDKIRMDLTKNYSLYEGLIAHLEPAVSR 349
||:..||||:.|::||:||.|||:|....|.:|.||||||::|||||::|
BPUM_0388___m 301 EYRIDEIELDIAIRTKKLIDFISNKTGYHLNENDSLYEGLVSHLEPAMNR 350
BSNT_00728___ 350 IKENIEIYNPMKEQIKRDYFLLYMAIEEGVEKYFPGMSFTDDEIAFIVLH 399
:||.:.||||:.:|||:|||||:||||||||::||.::|.:|||||||||
BPUM_0388___m 351 LKEKMRIYNPLTQQIKKDYFLLFMAIEEGVERFFPEIAFPEDEIAFIVLH 400
BSNT_00728___ 400 FGSALEIKKEEAKVKALVVCSSGIGSSKMLASRLKKEMPEIESFDMSSLI 449
|||.|||||||..:.||||||||||||||||||||||:|||..||:||||
BPUM_0388___m 401 FGSVLEIKKEETNIHALVVCSSGIGSSKMLASRLKKELPEIAEFDLSSLI 450
BSNT_00728___ 450 ELKGKDVQAYDMIVSTVPIPYENIDYIMVSPLLNEEDANQVKQYIKRKIP 499
|||..|..:|||||||||||||:||||||||||||:||.:||.:||||||
BPUM_0388___m 451 ELKEIDASSYDMIVSTVPIPYEHIDYIMVSPLLNEDDAMRVKAHIKRKIP 500
BSNT_00728___ 500 LILNKKR---STKEEAQQADVPDMLEAAESIGRYMEVIQNVLRHFTLAQL 546
.|:.||| :.||..|:: .:|:..||.:..||.||:::|.|||:.:.
BPUM_0388___m 501 YIIEKKRMKEADKESVQES--VNMMVVAEQVTNYMSVIRSILSHFTIEKR 548
BSNT_00728___ 547 KTNPDHSMLLLELFQQLKKDGLIRDPEKAEVCLAEREKQGGLGIPGTNMA 596
|..|.|...:.:|.:||:::|.|...::....|.|||:|||||||||..|
BPUM_0388___m 549 KAMPQHEATIKQLLRQLEEEGFITHADEVASGLLEREQQGGLGIPGTEFA 598
BSNT_00728___ 597 LYHLKNDEIVLPFFKMFDLSTSYEVDGMDGITLRMTRILVMMAPGSLSAE 646
|:|||:..|..|.|.|:||..:|||..|||...:|:|:|:|:||..|..|
BPUM_0388___m 599 LFHLKHAFIKEPIFHMYDLDQAYEVKSMDGGQQQMSRMLMMLAPQELGKE 648
BSNT_00728___ 647 GSEILSAISSAIIESGESMAGFQEEGEQELYQRLNRIFFTWMKEKNIL 694
|||:.|.|||:||||.|||..:....::::.|:|:::|:.::||...
BPUM_0388___m 649 GSEMFSLISSSIIESEESMTLYGHGSKEDIEQKLHQLFYQFVKEAKW- 695
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