Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00717 and BPUM_0384

See DNA alignment / Visit BSNT_00717 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:29
# Commandline: needle
#    -asequence pep-align/BSNT_00717___kipR.1.24716.seq
#    -bsequence pep-align/BPUM_0384___kipR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00717___kipR-BPUM_0384___kipR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00717___kipR-BPUM_0384___kipR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00717___kipR
# 2: BPUM_0384___kipR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 253
# Identity:     169/253 (66.8%)
# Similarity:   199/253 (78.7%)
# Gaps:           3/253 ( 1.2%)
# Score: 830.0
# 
#
#=======================================

BSNT_00717___      1 MQNKNKTVVKSMALLNLFLHKPSLTLSELVSLTGMPKTSVHRMVSSLEEM     50
                     |||.||||||||.:|.||:....|||:|::.|:||||||||||.|||.:|
BPUM_0384___k      1 MQNTNKTVVKSMEILRLFIAHDQLTLNEMIELSGMPKTSVHRMASSLTDM     50

BSNT_00717___     51 GFLSRDASGAYSLGLVFLEFGQLVADRLDIRKIAKPVMEELCREVDEAVQ    100
                     |.|.:..||.|.|||:|||:|||||||||||:||:|.||.|..||.||||
BPUM_0384___k     51 GLLEKHDSGVYRLGLMFLEYGQLVADRLDIRRIARPFMEGLRDEVGEAVQ    100

BSNT_00717___    101 LIMRDGNEAIYVEKIEGTQTVRLYTAIGRRSPLYAGACARSILSFLPREE    150
                     ||:|:|:|||||:||||||.||||||:||||||||||||||||||||..|
BPUM_0384___k    101 LIVREGDEAIYVDKIEGTQPVRLYTAVGRRSPLYAGACARSILSFLPETE    150

BSNT_00717___    151 IEAYIKQTELISIGSGTITDPEKLLQEIDASVQNGYTVSYSELENYTAAI    200
                     ..|||...||..||.|||||...|...::.|.:.|||:|||||||||||:
BPUM_0384___k    151 RLAYIDSIELGKIGIGTITDKAVLRNILEESNERGYTLSYSELENYTAAV    200

BSNT_00717___    201 GAPIFNHKRQVAAGISIAGFEARFTEDRLPYLTEKVKDAALQISRKIGYT    250
                     |||||||..:|.||||||||||.:.::|||||.|:||.||..|||::|:.
BPUM_0384___k    201 GAPIFNHLGEVTAGISIAGFEAGYQKERLPYLIEQVKKAASGISRELGFH    250

BSNT_00717___    250 ---    250
                        
BPUM_0384___k    251 LNK    253


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