Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00716 and BPUM_0383

See DNA alignment / Visit BSNT_00716 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:29
# Commandline: needle
#    -asequence pep-align/BSNT_00716___kipA.1.24716.seq
#    -bsequence pep-align/BPUM_0383___kipA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00716___kipA-BPUM_0383___kipA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00716___kipA-BPUM_0383___kipA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00716___kipA
# 2: BPUM_0383___kipA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 337
# Identity:     191/337 (56.7%)
# Similarity:   254/337 (75.4%)
# Gaps:           0/337 ( 0.0%)
# Score: 1017.0
# 
#
#=======================================

BSNT_00716___      1 MSMKVLKPGLLTTVQDIGRTGYQKYGVLASGAMDTVSLRIANLLIGNGEN     50
                     ||:.|:|||:.||:||.||.||||||||.||.||.:||||||:|.||.|:
BPUM_0383___k      1 MSIHVIKPGMFTTIQDKGRKGYQKYGVLTSGGMDPLSLRIANILTGNEES     50

BSNT_00716___     51 EAGLEITMMGPGPSFHFSKQTLIAVTGADFTLRINDEEAPLWKPVLIKEN    100
                     ||.||||:|||||.....|..||:|||||..:.|:.|.|.||||:.::..
BPUM_0383___k     51 EAVLEITLMGPGPVLTCQKDALISVTGADVEIDIDGEPASLWKPLFVRSG    100

BSNT_00716___    101 STVSFGPCKLGSRAYLAAAGGIEVPAVMDSKSTYVRGSIGGLHGRALQKE    150
                     ||::|||||.|.|:|||.|||.:|..||:|||||||..||||:||.|:|.
BPUM_0383___k    101 STLTFGPCKRGCRSYLAVAGGFDVETVMESKSTYVRAGIGGLNGRPLEKG    150

BSNT_00716___    151 DELNIGEMSALSQTILSRLSSLLGKQGFAAPKWSVSRGRFLPLKKNPVIR    200
                     |.|:||:.|.::..:.:||.|.|.:..::||.|:||...||||:|:||||
BPUM_0383___k    151 DVLSIGKPSLVANRLSNRLKSHLKQAAYSAPDWTVSHTHFLPLRKSPVIR    200

BSNT_00716___    201 VLEGKQFAFFTEESKTRFYEEAFRVTPQSDRMGYRLKGEPLELKAPLEMV    250
                     ||.|:..:||.|.|::.|:|:.|:|||||||||.||||||::||..||::
BPUM_0383___k    201 VLPGRHLSFFQESSQSTFFEQPFQVTPQSDRMGCRLKGEPVQLKEKLELI    250

BSNT_00716___    251 SEAVSFGTVQVPPDGNPIILLADRQTTGGYPRIAHIISADLPIVSQIMPG    300
                     ||||:||::|:||||.|||||||||||||||||..:.:.|||:::|.|||
BPUM_0383___k    251 SEAVAFGSIQIPPDGQPIILLADRQTTGGYPRIGEVATVDLPLIAQAMPG    300

BSNT_00716___    301 EHVQFEPVSLQEAEALAVEREQHIKELKTRMKMEWLT    337
                     .::.|:.:..|:||....::|..:|||..|:|:|...
BPUM_0383___k    301 ANLYFKRIDHQDAEQALFKQEAELKELAARIKLEAYV    337


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.