Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00714 and BPUM_0381

See DNA alignment / Visit BSNT_00714 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:29
# Commandline: needle
#    -asequence pep-align/BSNT_00714___ycsI.1.24716.seq
#    -bsequence pep-align/BPUM_0381___ycsI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00714___ycsI-BPUM_0381___ycsI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00714___ycsI-BPUM_0381___ycsI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00714___ycsI
# 2: BPUM_0381___ycsI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 263
# Identity:     175/263 (66.5%)
# Similarity:   204/263 (77.6%)
# Gaps:           0/263 ( 0.0%)
# Score: 943.0
# 
#
#=======================================

BSNT_00714___      1 MEQLNKMAPKDVRALIREGKINGPTAGMSGGYAQANLVVLKKDLAFDFLL     50
                     |.......|..:|.|||:.:|.|||||::.|||||||:::||:|||||||
BPUM_0381___y      1 MNIYQTYEPSQIRELIRKKEITGPTAGLAEGYAQANLMIVKKELAFDFLL     50

BSNT_00714___     51 FCQRNQKPCPVLDVTEAGSPVPSLAAPDADIRTDFPKYRIYRHGILTEEV    100
                     |||||...||:|||.|.|.|||..:||.||||||||||||||.|||.|||
BPUM_0381___y     51 FCQRNPAACPLLDVLEPGDPVPRKSAPKADIRTDFPKYRIYRKGILQEEV    100

BSNT_00714___    101 SDITPYWEDDFVGFLIGCSFSFEQALINNGIAVRHIDEGTNVSMYKTNID    150
                     |||:.|||||.|.|||||||:||.||:.|.|.||||:.|.||.||:|||.
BPUM_0381___y    101 SDISAYWEDDMVAFLIGCSFTFEHALMLNDIPVRHIENGHNVPMYQTNIA    150

BSNT_00714___    151 CVPAGAFHGQMVVSMRPVPERLAVRAAQVTSRFPAVHGGPIHIGNPGAIG    200
                     |..||.|||.|||||||:|.....|:.|||||||:|||||||||:|..||
BPUM_0381___y    151 CKRAGVFHGPMVVSMRPIPAHQITRSVQVTSRFPSVHGGPIHIGDPAMIG    200

BSNT_00714___    201 IRDLGKPDFGDAVSIRDGEVPVFWACGVTPQAVAMNVKPEMVITHAPGHM    250
                     |.::.:||||:...|::||||||||||||||||.|:.|||:.||||||||
BPUM_0381___y    201 IANVDQPDFGETSVIKEGEVPVFWACGVTPQAVVMHTKPEIAITHAPGHM    250

BSNT_00714___    251 LITDIRDESLAVL    263
                     .|||.||:.|.||
BPUM_0381___y    251 FITDQRDQQLGVL    263


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