Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00712 and BPUM_0380
See
DNA alignment /
Visit
BSNT_00712 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:29
# Commandline: needle
# -asequence pep-align/BSNT_00712___ycsG.1.24716.seq
# -bsequence pep-align/BPUM_0380___ycsG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00712___ycsG-BPUM_0380___ycsG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00712___ycsG-BPUM_0380___ycsG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00712___ycsG
# 2: BPUM_0380___ycsG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 405
# Identity: 312/405 (77.0%)
# Similarity: 356/405 (87.9%)
# Gaps: 1/405 ( 0.2%)
# Score: 1582.0
#
#
#=======================================
BSNT_00712___ 1 -MEQQKKTAGKKAGSWSLLMGAAFLMATSAIGPGFLTQTATFTNTLAASF 49
.:|:.|......|:.|:|||||||||||||||||||||..||..|.|||
BPUM_0380___y 1 MKKQEVKYTKASKGNRSMLMGAAFLMATSAIGPGFLTQTTVFTQQLTASF 50
BSNT_00712___ 50 GFVILISIILDIFAQTNVWRIIAVSGKRGQEIANMVLPGLGYFIAILVVL 99
||||||||:||||||||||||||||.||||:|||||||||||.:|:|:|:
BPUM_0380___y 51 GFVILISILLDIFAQTNVWRIIAVSEKRGQDIANMVLPGLGYVLAVLIVM 100
BSNT_00712___ 100 GGLAFNIGNIGGAGLGLQVLFGITPETGALISAVIAILIFVIKEAGKAMD 149
||||||||||.|||||.||:.||.|..||.||||||||||||||||||||
BPUM_0380___y 101 GGLAFNIGNIAGAGLGFQVITGIDPRIGAAISAVIAILIFVIKEAGKAMD 150
BSNT_00712___ 150 RFTQIAGFVMIILTVYVAATTAPPVGQAVANTFVPEHISIFAIVTLVGGT 199
|||||||||||.|.:|||.:||||||:|...||||:.|.|.:||||||||
BPUM_0380___y 151 RFTQIAGFVMIGLMLYVAISTAPPVGEAALRTFVPKEIDILSIVTLVGGT 200
BSNT_00712___ 200 VGGYITFAGGHRLLDAGIKGKESIPQVTKSSVVGILITSVMRIALFLAVL 249
|||||.|||||||||||||||:::||||||||.|||||||||:|||||||
BPUM_0380___y 201 VGGYIVFAGGHRLLDAGIKGKDALPQVTKSSVFGILITSVMRVALFLAVL 250
BSNT_00712___ 250 GVVSKGLHIDESNPAASVFKLAAGNVGYKIFGLIMWSAAITSVIGAAYTS 299
|||||||.||.:||.||||:||:||||||:||:|||:|||||||||||||
BPUM_0380___y 251 GVVSKGLQIDPANPPASVFQLASGNVGYKMFGIIMWAAAITSVIGAAYTS 300
BSNT_00712___ 300 VSFFKTFSPKIEKNSRGIIIGFIVVSTLAFVTIGQPAKILVLVGSLNGLI 349
||||||||||||:|.||||||||.:||:.|||||:|..||||||::|.||
BPUM_0380___y 301 VSFFKTFSPKIEQNQRGIIIGFIALSTICFVTIGRPVNILVLVGAINALI 350
BSNT_00712___ 350 LPIALGTLLVAAYKKNIVGDYKHPLWLTSTGALVVIVMAVMGIYTLITQL 399
||:||||||||||||:|||||:||.:||.:||.||::||:||.||:|.::
BPUM_0380___y 351 LPLALGTLLVAAYKKDIVGDYRHPFFLTVSGAFVVVIMALMGGYTIINEI 400
BSNT_00712___ 400 PQLWS 404
|:|||
BPUM_0380___y 401 PKLWS 405
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.