Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00709 and BPUM_0378

See DNA alignment / Visit BSNT_00709 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:29
# Commandline: needle
#    -asequence pep-align/BSNT_00709___ycsE.1.24716.seq
#    -bsequence pep-align/BPUM_0378___ycsE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00709___ycsE-BPUM_0378___ycsE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00709___ycsE-BPUM_0378___ycsE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00709___ycsE
# 2: BPUM_0378___ycsE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 251
# Identity:     185/251 (73.7%)
# Similarity:   220/251 (87.6%)
# Gaps:           2/251 ( 0.8%)
# Score: 1001.0
# 
#
#=======================================

BSNT_00709___      1 MSVQREDVDIKLIAIDMDGTLLNDEQLISDENRKAIREAEDKGVYVVIST     50
                     ||:|.:..||:||||||||||||.|.:|.:||::||::||.|||:|||||
BPUM_0378___y      1 MSIQADKKDIRLIAIDMDGTLLNSEHVIPEENKQAIKDAEAKGVHVVIST     50

BSNT_00709___     51 GRTLMTCRELAESLKLSSFLITANGSEIWDSNFNLVERKLLHTDHIQMMW    100
                     ||||||||||.|.|||||:|:||||||||||||.|:||.|||.||:||||
BPUM_0378___y     51 GRTLMTCRELVEPLKLSSYLVTANGSEIWDSNFQLIERDLLHPDHVQMMW    100

BSNT_00709___    101 DLRNKHNTNFWASTVNKVWRGEFPENITDHEWLKFGFDIEDDDIRNEVLQ    150
                     ||:|::.|::|||||:|||||||||.|.|||||||||||.|||:|.|||.
BPUM_0378___y    101 DLKNRYETDYWASTVDKVWRGEFPERIHDHEWLKFGFDIHDDDVREEVLN    150

BSNT_00709___    151 ELRKNKELEITNSSPTNIEVNALGINKAAALAKVTEKLGITMENVMAMGD    200
                     .|:.|:.|||||||||||||||.|||||||||||.|::|.||:|||::||
BPUM_0378___y    151 TLKTNEHLEITNSSPTNIEVNAAGINKAAALAKVAERIGCTMDNVMSLGD    200

BSNT_00709___    201 SLNDIAMIKEAGLGVAMGNAQDIVKETADYITDTNIEDGVAKAIRHWVL-    249
                     ||||:|||:|||||:||||||::|||.||:||..|.|.||||||:|||| 
BPUM_0378___y    201 SLNDMAMIQEAGLGIAMGNAQEVVKEAADWITAPNTEHGVAKAIQHWVLS    250

BSNT_00709___    249 -    249
                      
BPUM_0378___y    251 K    251


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