Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00709 and BPUM_0378
See
Amino acid alignment /
Visit
BSNT_00709 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:29
# Commandline: needle
# -asequence dna-align/BSNT_00709___ycsE.1.24716.seq
# -bsequence dna-align/BPUM_0378___ycsE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00709___ycsE-BPUM_0378___ycsE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00709___ycsE-BPUM_0378___ycsE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00709___ycsE
# 2: BPUM_0378___ycsE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 769
# Identity: 552/769 (71.8%)
# Similarity: 552/769 (71.8%)
# Gaps: 32/769 ( 4.2%)
# Score: 1871.0
#
#
#=======================================
BSNT_00709___ 1 ATGTCTGTTCAA--AGAGAAGATGTAGATATCAAGCTGATCGCAATTGAT 48
.||||..|.||| .||.|||| .|||.|||....||||.||.||||||
BPUM_0378___y 1 TTGTCCATACAAGCTGATAAGA--AAGACATCCGATTGATTGCCATTGAT 48
BSNT_00709___ 49 ATGGATGGTACACTGCTGAACGACGAGCAGCTGATCTCGGATGAAAACCG 98
||||||||.||.|||.|.|||...||.||..|.||..|.||.||||||..
BPUM_0378___y 49 ATGGATGGCACGCTGTTAAACAGTGAACACGTCATTCCAGAGGAAAACAA 98
BSNT_00709___ 99 CAAAGCCATTCGTGAAGCGGAGGATAAAGGTGTGTATGTGGTGATCAGCA 148
..||||||||...||.||.||.|..|||||.||..||||.|||||.||||
BPUM_0378___y 99 ACAAGCCATTAAAGATGCTGAAGCAAAAGGAGTCCATGTAGTGATTAGCA 148
BSNT_00709___ 149 CGGGCCGGACGCTGATGACGTGCCGGGAGCTGGCGGAATCGCTAAAGCTG 198
|.||.||.||.||||||||.|||||.|||||.|..||..||||.||||||
BPUM_0378___y 149 CAGGGCGCACACTGATGACATGCCGAGAGCTCGTTGAGCCGCTTAAGCTG 198
BSNT_00709___ 199 TCATCCTTTCTAATCACGGCAAACGGCAGTGAAATTTGGGATTCGAATTT 248
||.||.|..||..|.||.||.|||||.||||||||.||||||||.||.||
BPUM_0378___y 199 TCTTCTTACCTTGTGACAGCCAACGGAAGTGAAATCTGGGATTCAAACTT 248
BSNT_00709___ 249 TAATTTGGTGGAACGGAAGCTGCTTCATACGGACCATATTCAAATGATGT 298
..|..||.|.|||||..|.|||||.|||.|.||.|||.|.||||||||||
BPUM_0378___y 249 CCAACTGATCGAACGAGATCTGCTACATCCTGATCATGTCCAAATGATGT 298
BSNT_00709___ 299 GGGATTTGCGGAATAAGCACAACACTAATTTCTGGGCTTCTACGGTGAAT 348
|||||.|....||||.|.||.|.||..|||.|||||||||.||.|||.||
BPUM_0378___y 299 GGGATCTAAAAAATAGGTACGAAACCGATTACTGGGCTTCCACTGTGGAT 348
BSNT_00709___ 349 AAAGTATGGAGAGGCGAGTTTCCGGAA--AA--CATTACGGATCATGAAT 394
||.||.||||||||.||.||.||.||| || ||| ||.|||||||
BPUM_0378___y 349 AAGGTGTGGAGAGGTGAATTCCCAGAACGAATTCAT----GACCATGAAT 394
BSNT_00709___ 395 GGCTCAAATTCGGCTTTGACATTGAGGATGACGATATCCGAAACGAAGTG 444
||.|.|||||.||||||||.|||.|.|||||.||..|.||..|.|||||.
BPUM_0378___y 395 GGTTGAAATTTGGCTTTGATATTCATGATGATGACGTTCGTGAGGAAGTA 444
BSNT_00709___ 445 CTTCAGGAGC--TGAGAAAAAACAAA-GAG---CTCGAAATCACAAATTC 488
| |||..| | || |||||||| ||| ||.||||||||||||||
BPUM_0378___y 445 C-TCAATA-CATTG----AAAACAAATGAGCATCTAGAAATCACAAATTC 488
BSNT_00709___ 489 AAGTCCGACAAACATTGAAGTCAACGC-GCTTGGCATCAACAAAGCTGCA 537
|||||||||.||.|||||||||||.|| || .|||||.||||||||.|||
BPUM_0378___y 489 AAGTCCGACCAATATTGAAGTCAATGCAGC-GGGCATTAACAAAGCGGCA 537
BSNT_00709___ 538 GCCCTTGCCAAGGTTACGGAAAAACTCGGCATTACAATGGAGAATGTGAT 587
||.|||||.|||||..|||||....|.|||..|||.|||||.|||||.||
BPUM_0378___y 538 GCTCTTGCAAAGGTAGCGGAACGCATTGGCTGTACGATGGACAATGTCAT 587
BSNT_00709___ 588 GGCGATGGGCGACAGCCTTAATGACATTGCGATGATCAAAGAAGCGGGTC 637
|.|..|.|||||||||||.|||||.||.||.||||||.|||||||.||..
BPUM_0378___y 588 GTCACTTGGCGACAGCCTAAATGATATGGCCATGATCCAAGAAGCCGGAT 637
BSNT_00709___ 638 TTGGCGTCGCAATGGGCAATGCGCAAGACATCGTAAAAGAAACGGCTGAT 687
|.|||.|.||.|||||.|||||||||||..|.|||||||||.|.||||||
BPUM_0378___y 638 TAGGCATTGCGATGGGAAATGCGCAAGAAGTGGTAAAAGAAGCCGCTGAT 687
BSNT_00709___ 688 TATATCACGGATACAAATATTGAGGATGGTGTCGCTAAAGCGATTCGCCA 737
|..||.||.|.|.|.||.|..|||.|||||||.||.||.|||||.|..||
BPUM_0378___y 688 TGGATTACAGCTCCTAACACAGAGCATGGTGTAGCAAAGGCGATCCAGCA 737
BSNT_00709___ 738 TTGGGTACT------ATAA 750
||||||.|| ||||
BPUM_0378___y 738 TTGGGTGCTGTCTAAATAA 756
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.