Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01772 and BPUM_0377

See DNA alignment / Visit BSNT_01772 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:16
# Commandline: needle
#    -asequence pep-align/BSNT_01772___yhjA.1.24716.seq
#    -bsequence pep-align/BPUM_0377.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01772___yhjA-BPUM_0377.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01772___yhjA-BPUM_0377.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01772___yhjA
# 2: BPUM_0377
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 90
# Identity:      57/90 (63.3%)
# Similarity:    66/90 (73.3%)
# Gaps:           2/90 ( 2.2%)
# Score: 282.0
# 
#
#=======================================

BSNT_01772___      1 -MKKAVAVLLSLGLVFGFSYGADHVAEAKTKVKVYKNCKELNKVYKGGVA     49
                      :||.:..:|||||:...:....|.|:||| ||.|||||.||||||||||
BPUM_0377          1 MLKKIMVAVLSLGLLLSVTQVDTHTADAKT-VKSYKNCKALNKVYKGGVA     49

BSNT_01772___     50 RTSKAKNKGGKTKYKPYVSKDLYDANKNKDRDKDLIACER     89
                     ::...||||||||||||.||.||..||:.|||||.|||||
BPUM_0377         50 KSKNTKNKGGKTKYKPYASKALYLKNKHLDRDKDGIACER     89


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.