Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00692 and BPUM_0367
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:28
# Commandline: needle
# -asequence pep-align/BSNT_00692___ycnI.1.24716.seq
# -bsequence pep-align/BPUM_0367___ycnI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00692___ycnI-BPUM_0367___ycnI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00692___ycnI-BPUM_0367___ycnI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00692___ycnI
# 2: BPUM_0367___ycnI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 208
# Identity: 117/208 (56.2%)
# Similarity: 148/208 (71.2%)
# Gaps: 8/208 ( 3.8%)
# Score: 610.0
#
#
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BSNT_00692___ 1 MLKKIALTLCPAIVGSLLFFTAPASAHVSVKPAESAAGSWETYTIKVPSE 50
:||....|.|.::.|.| ...|.||||:|||..||..:|||||:|||||
BPUM_0367___y 1 -MKKYVKALLPMLLASFL-LAIPVSAHVTVKPDTSATNAWETYTLKVPSE 48
BSNT_00692___ 51 KNLPTTKVVLKMPKDVEFQQYEPIPGWKVSTQKHDDKSVSVTWEATDGGI 100
.:.||||||:.|||.||||||||:||||.||::.|.|...||||||..|:
BPUM_0367___y 49 SDSPTTKVVITMPKGVEFQQYEPVPGWKTSTEEKDGKVTRVTWEATGKGV 98
BSNT_00692___ 101 QEGQFQQFTFVAKNPDKAEEAAWDAYQYYKDGSIVEWTGDEDADTPHSIT 150
..||||||.||||||:||.|||||||||||||::||||||::||.|||||
BPUM_0367___y 99 LAGQFQQFVFVAKNPEKAGEAAWDAYQYYKDGTVVEWTGDKEADKPHSIT 148
BSNT_00692___ 151 NITSAKQVTDEHGATK-TEDDSENSGSSALNITAIVLSAAAIILSVAAL- 198
||.::..|||.||..| .|:.:..:.|::.:...:.||.||::|::.||
BPUM_0367___y 149 NIVASNTVTDSHGQEKPKEEKASETASNSSSPLVLGLSIAALVLALIALG 198
BSNT_00692___ 199 --VKKKRA 204
.:||
BPUM_0367___y 199 LAFRKK-- 204
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