Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00692 and BPUM_0367
See
Amino acid alignment /
Visit
BSNT_00692 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:28
# Commandline: needle
# -asequence dna-align/BSNT_00692___ycnI.1.24716.seq
# -bsequence dna-align/BPUM_0367___ycnI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00692___ycnI-BPUM_0367___ycnI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00692___ycnI-BPUM_0367___ycnI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00692___ycnI
# 2: BPUM_0367___ycnI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 690
# Identity: 406/690 (58.8%)
# Similarity: 406/690 (58.8%)
# Gaps: 150/690 (21.7%)
# Score: 1165.5
#
#
#=======================================
BSNT_00692___ 1 TTGTTGAAAAAAATCGCATTGACACTATGTCCGGCTA------------- 37
.|||||||| ||||| ||
BPUM_0367___y 1 ---ATGAAAAAA-------------TATGT-----TAAAGCTTTATTACC 29
BSNT_00692___ 38 -----TTGTCGGCTCCCTCTTATTCTTTACGGC---CCCTGCCAGCGCGC 79
||.|||..||..|.||||| ||| .||||..||.||||
BPUM_0367___y 30 AATGCTTCTCGCTTCATTTTTATT------GGCGATTCCTGTGAGTGCGC 73
BSNT_00692___ 80 ATGTTTCTGTAAAACCGGCTGAGTCTGCTGCAGGCTCTTGGGAAACGTAT 129
|.||..|.||.|||||||.|...|||||..||....|.||||||||.||.
BPUM_0367___y 74 ACGTCACGGTTAAACCGGATACATCTGCGACAAATGCGTGGGAAACATAC 123
BSNT_00692___ 130 ACAATAAAGGTTCCTTCAGAGA---AAAATCTGCCGACAACGAAGGTTGT 176
||..|.||.||.|||||.||.| |.|.| ||.|||||.||||||||
BPUM_0367___y 124 ACGTTGAAAGTACCTTCTGAAAGTGACAGT---CCAACAACAAAGGTTGT 170
BSNT_00692___ 177 CCTCAAAATGCCGAAGGATGTTGAATTCCAGCAATATGAGCCAATTCCGG 226
|.|||.||||||.||||..||.||||||||||||||.||||||.|.||.|
BPUM_0367___y 171 CATCACAATGCCTAAGGGCGTAGAATTCCAGCAATACGAGCCAGTACCCG 220
BSNT_00692___ 227 GCTGGAAGGTTTCCACTCAAAAACATGATGACAAATCAGTGTC---CGTG 273
|||||||....||.|||.||.||.|.||||.||| .|||.| .||.
BPUM_0367___y 221 GCTGGAAAACGTCAACTGAAGAAAAAGATGGCAA---GGTGACAAGAGTA 267
BSNT_00692___ 274 ACATGGGAGGCGACTGACGG----AGGCATTCAGGAAGGACAGTTCCAGC 319
||.|||||.|| .|||| ||||.|.|..|..|||||||||||||
BPUM_0367___y 268 ACTTGGGAAGC----AACGGGTAAAGGCGTGCTTGCCGGACAGTTCCAGC 313
BSNT_00692___ 320 A----GTTTACCTTTGTTGCCAAAAACCCTGACAAAGCGGAGGAAGCTGC 365
| ||| |||||.||.|||||||||||.|||||.|..||||||||
BPUM_0367___y 314 AATTCGTT----TTTGTAGCGAAAAACCCTGAAAAAGCAGGCGAAGCTGC 359
BSNT_00692___ 366 TTGGGACGCATACCAATATTACAAAGACGGCAGCATTGTTGAGTGGACAG 415
.|||||.|||||.||||||||.||.||.||.|...|.|||||.|||||.|
BPUM_0367___y 360 ATGGGATGCATATCAATATTATAAGGATGGAACGGTCGTTGAATGGACTG 409
BSNT_00692___ 416 GTGACGAGGATGCCGATACACCTCATTCCATTACAAACA---TCACGTCT 462
|.||..|.||.||.||||..||.|||||.||.||||||| ||.|.|||
BPUM_0367___y 410 GCGATAAAGAGGCTGATAAGCCGCATTCAATCACAAACATTGTCGCCTCT 459
BSNT_00692___ 463 GCAAAACAAGTGACAGATGAGCACGGGGCCACGAAAA--------CAGAA 504
||.|| .||.||.||| .|.|..||.||.||||| .||||
BPUM_0367___y 460 --AATAC-GGTAACGGAT--TCCCATGGTCAAGAAAAACCTAAAGAAGAA 504
BSNT_00692___ 505 GACGATTCCGAAA---ACTCAGGTTCTTCAGCTCTAAACATTACAGCGAT 551
.|.|..||.|||| .|||...|||||| |.||.|..|
BPUM_0367___y 505 AAGGCATCAGAAACAGCCTCCAATTCTTC------------TTCACCACT 542
BSNT_00692___ 552 TGTGC------TGTC---TGCAGCTGCCATTATTTTATCTGTAGCA---- 588
||||| |||| |||.||| .||.||| |||||
BPUM_0367___y 543 TGTGCTAGGGTTGTCCATTGCTGCT----CTAGTTT-----TAGCACTCA 583
BSNT_00692___ 589 --GCACTTG--------TTAAGAAAAAGCGTGCGTAA--- 615
||.|||| ||.||||||| ||
BPUM_0367___y 584 TTGCGCTTGGGCTTGCTTTTAGAAAAA--------AATAA 615
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.