Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00687 and BPUM_0364
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:28
# Commandline: needle
# -asequence pep-align/BSNT_00687___gabD.1.24716.seq
# -bsequence pep-align/BPUM_0364___gabD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00687___gabD-BPUM_0364___gabD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00687___gabD-BPUM_0364___gabD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00687___gabD
# 2: BPUM_0364___gabD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 464
# Identity: 350/464 (75.4%)
# Similarity: 411/464 (88.6%)
# Gaps: 2/464 ( 0.4%)
# Score: 1909.0
#
#
#=======================================
BSNT_00687___ 1 MPDQLTVYNPATGEEIKTIPQQSAKEVEEAIERSHQAFKTWSKTSANERA 50
|.::|.||||||||||.::.|.:.:::|:||.|||||||.|:||||:|||
BPUM_0364___g 1 MTNELKVYNPATGEEIASVAQHTKEQIEDAISRSHQAFKAWAKTSAHERA 50
BSNT_00687___ 51 SLLKKWYELIVEHKEELADLITKENGKPYQEAVGEVLYGAGYIEWFAEEA 100
::::||::|::||||.||.:||||||||||||:||::|.||||||:||||
BPUM_0364___g 51 NIIRKWFDLMIEHKERLAKIITKENGKPYQEALGEIVYAAGYIEWYAEEA 100
BSNT_00687___ 101 KRVYGRTVPAPTTGKRIVVTRQPVGPVAAITPWNFPNAMITRKAAPALAA 150
||:||||:|:.||.||:.||:|||||||||||||||.|||||||||||||
BPUM_0364___g 101 KRIYGRTIPSHTTNKRLFVTKQPVGPVAAITPWNFPAAMITRKAAPALAA 150
BSNT_00687___ 151 GCTFIIKPAPDTPLSAYELARLAYEAGIPKDVLQVVIGDGEEIGNVFTSS 200
|||||:|||.||||:|.||.:|.:|||||:|.||.|||||:|:|.:||.|
BPUM_0364___g 151 GCTFIVKPAEDTPLTAIELVKLGHEAGIPEDALQWVIGDGKEVGEIFTDS 200
BSNT_00687___ 201 PKIRKITFTGSTPVGKILMKNSADTVKHVSMELGGHAPLIVDEDADIDLA 250
|.||||||||||||||.|:||||.||||||||||||||||||:||:::||
BPUM_0364___g 201 PLIRKITFTGSTPVGKHLIKNSASTVKHVSMELGGHAPLIVDKDANLELA 250
BSNT_00687___ 251 VEQAMASKYRNAGQTCVCANRLIVHESIKDEFAAKLSEQVSKLRVGNGLE 300
|:||||||:|||||||||||||||||.|.:.||...|::|.||:||||.|
BPUM_0364___g 251 VKQAMASKFRNAGQTCVCANRLIVHEDIHEAFAQVFSKEVEKLKVGNGFE 300
BSNT_00687___ 301 EGVNVGPIINKRGFEKIVSQIDDAVEKGAKVIAGGTYDRNDDKGCYFVNP 350
||.::|||||||||:||||||.|||:||||::.||....:|||..|||.|
BPUM_0364___g 301 EGTSIGPIINKRGFDKIVSQIQDAVDKGAKILVGGDTHFDDDKSYYFVQP 350
BSNT_00687___ 351 TVLTDVDTSMNIMHEETFGPVAPIVTFSDIDEAIQLANDTPYGLAAYFFT 400
||||.||.||||||||||||||||.||..:||||:||||||:||||||||
BPUM_0364___g 351 TVLTHVDPSMNIMHEETFGPVAPITTFKTLDEAIELANDTPFGLAAYFFT 400
BSNT_00687___ 401 ENYRRGIYISENLEYGIIGWNDGGPSAVQAPFGGMKESGIGREGGSEGIE 450
||||.|:||||||:|||||||||||||||||||||||||||||||.||||
BPUM_0364___g 401 ENYRNGLYISENLDYGIIGWNDGGPSAVQAPFGGMKESGIGREGGIEGIE 450
BSNT_00687___ 451 PYLETKYLSIGL-- 462
|||||||:||||
BPUM_0364___g 451 PYLETKYVSIGLDE 464
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