Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00679 and BPUM_0357
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:27
# Commandline: needle
# -asequence pep-align/BSNT_00679___ycnB.1.24716.seq
# -bsequence pep-align/BPUM_0357___ycnB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00679___ycnB-BPUM_0357___ycnB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00679___ycnB-BPUM_0357___ycnB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00679___ycnB
# 2: BPUM_0357___ycnB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 485
# Identity: 327/485 (67.4%)
# Similarity: 400/485 (82.5%)
# Gaps: 21/485 ( 4.3%)
# Score: 1687.0
#
#
#=======================================
BSNT_00679___ 1 MNTSIEQKPFNRSVIVGILLAGAFVAILNQTLLITALPHIMRDFNVDANQ 50
||.|... :||||||||.|.|||||||||||||.|:||||.:||:|.::
BPUM_0357___y 1 MNQSTTS--YNRSVIVGIFLVGAFVAILNQTLLIPAIPHIMEEFNIDVSK 48
BSNT_00679___ 51 AQWLTTSFMLTNGILIPITAFLIEKFTSRALLITAMSIFTAGTVVGAFAP 100
.|||||:|||||||||||||||||||:||:|::||:|||||||::.:||.
BPUM_0357___y 49 GQWLTTAFMLTNGILIPITAFLIEKFSSRSLVLTALSIFTAGTILASFAT 98
BSNT_00679___ 101 NFPVLLTARIIQAAGAGIMMPLMQTVFLTIFPIEKRGQAMGMVGLVISFA 150
||||||.|||:|||||||:||||||:||||||.|||||||||||||||||
BPUM_0357___y 99 NFPVLLAARIVQAAGAGILMPLMQTIFLTIFPKEKRGQAMGMVGLVISFA 148
BSNT_00679___ 151 PAIGPTLSGWAVEAFSWRSLFYIILPFAVIDLILASILMKNVTTLRKTQI 200
||:||||.||.|::|||:.||||:||..:||||||..||||||..|:|:|
BPUM_0357___y 149 PALGPTLGGWIVDSFSWKFLFYIVLPIGIIDLILAFFLMKNVTQQRETRI 198
BSNT_00679___ 201 DILSVILSTFGFGGLLYGFSSVGSYGWSSSTVLISLLVGVIALLLFITRQ 250
|:||||||:||||||||||||||:|||:|:||||||:||.::|..||.||
BPUM_0357___y 199 DVLSVILSSFGFGGLLYGFSSVGTYGWTSATVLISLIVGAVSLFFFILRQ 248
BSNT_00679___ 251 MKLEKPMLEFRVFTFGVFSLTTLLGTLVFALLIGTETILPLYTQNVRDVT 300
..|.:|||||.||.|.:|||||.||.|||||||||||||||||||||.::
BPUM_0357___y 249 SNLTRPMLEFGVFKFAIFSLTTFLGMLVFALLIGTETILPLYTQNVRGLS 298
BSNT_00679___ 301 AFDTGLMLLPGAVVMGFMSPIIGRIFDRVGGRGLAIAGFCIIFLTSLPFM 350
|.||||:|||||:.||.:|||||||||:|||:|||:.||.|:.:|:||||
BPUM_0357___y 299 ALDTGLILLPGALFMGLLSPIIGRIFDKVGGKGLALGGFTILTVTTLPFM 348
BSNT_00679___ 351 QLTDHTSLAWIVVLYTVRLLGTAMIMMPVTTAGINALPRHLIPHGTAMNN 400
.||..:|:|.|.|.||:||:|..|||||:||||||:||.|||||||||||
BPUM_0357___y 349 LLTLDSSIALITVAYTLRLIGVGMIMMPLTTAGINSLPPHLIPHGTAMNN 398
BSNT_00679___ 401 TIRQVGGSIGTALLVSVMSNQAAHAGTTNVKHAALHGMNAAFIVAAVIAL 450
|:||:|||||||:|||:||:.||:|...:...:|:||||.:|.::.:||:
BPUM_0357___y 399 TMRQMGGSIGTAVLVSIMSSSAANAELASPLKSAVHGMNTSFFISGLIAV 448
BSNT_00679___ 451 VGFLLSFTLKKPQRPAEQQPAR------------- 472
:|.:|||.|| |::.::
BPUM_0357___y 449 LGLVLSFFLK------EKRNSKVMKQELSSSSSSS 477
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