Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06058 and BPUM_0349

See DNA alignment / Visit BSNT_06058 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:36
# Commandline: needle
#    -asequence pep-align/BSNT_06058___yxeO.1.24716.seq
#    -bsequence pep-align/BPUM_0349___yxeO.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06058___yxeO-BPUM_0349___yxeO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06058___yxeO-BPUM_0349___yxeO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06058___yxeO
# 2: BPUM_0349___yxeO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity:     192/249 (77.1%)
# Similarity:   222/249 (89.2%)
# Gaps:           1/249 ( 0.4%)
# Score: 974.0
# 
#
#=======================================

BSNT_06058___      1 MITVKNIRKAFKDLVVLDGIDLEVKRGEVVAIIGPSGSGKSTLLRCLNLL     50
                     ||.:.|::|:|.||||||||:|:|::|:||||||||||||||||||||||
BPUM_0349___y      1 MIKLTNLKKSFGDLVVLDGINLDVQKGQVVAIIGPSGSGKSTLLRCLNLL     50

BSNT_06058___     51 ERPDQGLIEIGEAKLNAEKFTRKEAYRLRQQTAMVFQNYNLFKNKTALQN    100
                     |.||:|.||||:|||:|.|:|||||:.|||||||||||||||||||||||
BPUM_0349___y     51 EIPDEGTIEIGDAKLDASKYTRKEAHHLRQQTAMVFQNYNLFKNKTALQN    100

BSNT_06058___    101 ITEALIVAQHKPRDEAKRIGMEILKQVGLEHKADSYPITMSGGQQQRIGI    150
                     |||:|:|.:...:.:|..|||::|||||||.||||||:|:||||||||||
BPUM_0349___y    101 ITESLLVTKKMTKQQANEIGMKLLKQVGLEQKADSYPVTLSGGQQQRIGI    150

BSNT_06058___    151 ARALAVNPHAILLDEPTSALDPELVTGVLQVIKSIAEKQTTMIIVTHEMA    200
                     ||||||:||||||||||||||||||:||||||||||.::|||||||||||
BPUM_0349___y    151 ARALAVDPHAILLDEPTSALDPELVSGVLQVIKSIAIQETTMIIVTHEMA    200

BSNT_06058___    201 FAKEVADKVIFMADGHIIEQGTPKELFDHPKNERTKRFIKQVGEPAELI    249
                     ||:||||.|||||||||||||||.||||..|||||||||::.....|. 
BPUM_0349___y    201 FAREVADHVIFMADGHIIEQGTPTELFDETKNERTKRFIQKEAAAEEA-    248


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