Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06061 and BPUM_0346

See DNA alignment / Visit BSNT_06061 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:36
# Commandline: needle
#    -asequence pep-align/BSNT_06061___yxeL.1.24716.seq
#    -bsequence pep-align/BPUM_0346___yxeL.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06061___yxeL-BPUM_0346___yxeL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06061___yxeL-BPUM_0346___yxeL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06061___yxeL
# 2: BPUM_0346___yxeL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity:     114/168 (67.9%)
# Similarity:   141/168 (83.9%)
# Gaps:           4/168 ( 2.4%)
# Score: 640.0
# 
#
#=======================================

BSNT_06061___      1 MKPQYRLAVERDAEQLLALTLRAYEPIRKLGIRFAAAHADLDLVLQNIRE     50
                     |...:|||.|.|.|.||.||.|||||||:|||:|.|||||..||.:|:::
BPUM_0346___y      1 MGYTFRLATEADIEALLELTTRAYEPIRELGIQFQAAHADFALVQKNVQK     50

BSNT_06061___     51 NACYVMEEDGRIIATITLRMPWGKQPGPYGVPHIWWFAVDPGTGKKGIGT    100
                     |.||||||:|.:::|::||||||:||||:|||||||||.:| :.|||.|:
BPUM_0346___y     51 NLCYVMEENGELLSTLSLRMPWGEQPGPFGVPHIWWFASEP-SAKKGTGS     99

BSNT_06061___    101 KLLQWLEETILRDTLKVPFVSLGTADKHPWLIEMYERKGYVRSGEQDLGK    150
                     .||.|:|..:||||||||:|||||||||||||:|||||||||:||:||||
BPUM_0346___y    100 ILLDWVETEVLRDTLKVPYVSLGTADKHPWLIDMYERKGYVRAGEKDLGK    149

BSNT_06061___    151 GHITVYMKKQLRHDL---    165
                     ||||:|:|||||.|:   
BPUM_0346___y    150 GHITIYLKKQLRSDITQP    167


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