Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00656 and BPUM_0344
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:26
# Commandline: needle
# -asequence pep-align/BSNT_00656___yclG.1.24716.seq
# -bsequence pep-align/BPUM_0344___yclG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00656___yclG-BPUM_0344___yclG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00656___yclG-BPUM_0344___yclG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00656___yclG
# 2: BPUM_0344___yclG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 605
# Identity: 277/605 (45.8%)
# Similarity: 382/605 (63.1%)
# Gaps: 24/605 ( 4.0%)
# Score: 1406.5
#
#
#=======================================
BSNT_00656___ 1 ----------------MAEFILNAADFGVPGDGKTDSTERINQCLSTAVS 34
:.:.::|..||||..|||||.|.::|:||....:
BPUM_0344___y 1 MCEKEEFRLGELNESDLKKPVVNVQDFGVVADGKTDCTAKLNECLEWTKA 50
BSNT_00656___ 35 KGYHTVWFPKGTYLIDATLGGDLNQRFRNAGIIVPGNLEIMMDPECIMKV 84
:||..||.|.|||:|||...||....||.|||.||.::.|.|.|:.::||
BPUM_0344___y 51 QGYSHVWLPSGTYVIDAVYRGDRFFPFRGAGIRVPSHMTIEMAPDAVIKV 100
BSNT_00656___ 85 IPNSSWGYSAFYVGKQENITISGGQIIGERDEHTYVS-AGIRSTHEWGFG 133
|||.||||:|||:||.:::||.||:|.|:|.||.|.| ...|.|||||||
BPUM_0344___y 101 IPNDSWGYAAFYIGKVQHVTIRGGRIEGDRHEHVYKSLPPERKTHEWGFG 150
BSNT_00656___ 134 ICIEGCSNVLIDDVKISDFTGDGIIVSPRGLKTN-QDYRTSEQIIIRRCE 182
|||||.|:|.::.|:|.:.|||||||||.||.:. :.|..:..|.|..|.
BPUM_0344___y 151 ICIEGASDVEVNRVQIKNCTGDGIIVSPHGLLSQVETYSPASSIHISGCH 200
BSNT_00656___ 183 VRRSRRNNISITGCDMVTVEECLIEDAGTGNGTAPKFGIDIEGYGEGDVD 232
|..||||||||||||.|.||:||:|.||. ||..|:.|||||||||..|:
BPUM_0344___y 201 VTDSRRNNISITGCDGVIVEDCLLERAGV-NGVEPRMGIDIEGYGENAVN 249
BSNT_00656___ 233 YEEPINVSIRNNHFVGNVSSSVTNFNGYGILIEGNHSDNTISYGYGTQTV 282
.|||:|:.||||...|..:||:.||||||::|||||:|::||||:.|:|:
BPUM_0344___y 250 MEEPLNIQIRNNIVRGGAASSIYNFNGYGVIIEGNHTDSSISYGFATETI 299
BSNT_00656___ 283 IKGNILRRPEDAAAAPRVGITGLGVSQGKETSDAVIAGNLITGFSTGIDV 332
|..|::|.. .....:.|||.||||.|:..::.:|.||:|.||..||||
BPUM_0344___y 300 IANNLIRAV--GGGVTKAGITSLGVSLGQTENNVIIIGNMIEGFEKGIDV 347
BSNT_00656___ 333 RGKSVLVTNNKISNFENTGILVYQSSDVKVDGNQIQNGLSETRRSIGLRA 382
||.||.:|.||||.||:..:.||.::.:.::||.|::|.:...||..||.
BPUM_0344___y 348 RGDSVHITGNKISLFEDAALSVYMANRILIEGNHIESGTNTGLRSAALRI 397
BSNT_00656___ 383 VLSDDIAFLNNCLIQVVDGVNVSGGNMIIKDNLLRKFSRGIWIAQGNAVI 432
..||.:.|.||.:..|:||..|.|.|::|:.|..::||||||:.:|.|.|
BPUM_0344___y 398 YQSDSVVFSNNTIYSVIDGAMVRGTNILIQHNQFKEFSRGIWVQEGEAGI 447
BSNT_00656___ 433 EGNILNPDAFEAVPESYSVSVTNNAGAIIKNNTFKEFKNYPIYCSTSAKT 482
.||....:..:.:..||::|||.||.|.|.:|.||.::||.:|.:|:...
BPUM_0344___y 448 NGNHFIQEGHQELGSSYTISVTGNAKAFIWHNRFKHYQNYAVYSNTTGPL 497
BSNT_00656___ 483 SIIGNHLERSPLLVTIYISAGVHEIFDNTISVNRTAGNPIVIYINGSAGS 532
.|..|..|.|.|.|.:||..|..:|.||...:||:.|.|..|:|:.:|.:
BPUM_0344___y 498 EIKDNSFEESSLYVVMYIKNGSPQIGDNRFYLNRSFGQPTAIFIDQAASA 547
BSNT_00656___ 533 IVSGNTINNLSADTATAIQTTTSTNSKIIGNRIFKGTINKHSSDTIDGNM 582
.|..|.|.|||...|.|::|.:||:|.|..|.:.:..:..|::|.|.||:
BPUM_0344___y 548 RVLRNNIINLSPQKAIAVRTISSTHSVIAHNMLERSQLATHTTDRIIGNI 597
BSNT_00656___ 583 IV--- 584
.:
BPUM_0344___y 598 EIDTP 602
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