Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00642 and BPUM_0340

See DNA alignment / Visit BSNT_00642 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:26
# Commandline: needle
#    -asequence pep-align/BSNT_00642___yckK.1.24716.seq
#    -bsequence pep-align/BPUM_0340___yckK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00642___yckK-BPUM_0340___yckK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00642___yckK-BPUM_0340___yckK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00642___yckK
# 2: BPUM_0340___yckK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     204/271 (75.3%)
# Similarity:   238/271 (87.8%)
# Gaps:           3/271 ( 1.1%)
# Score: 1087.0
# 
#
#=======================================

BSNT_00642___      1 MKKALLALFMVVSIAALAACGAG---NDNQSKDNAKDGDLWASIKKKGVL     47
                     |||...|:.:...:|.:.|||:|   |.|:...:.:.||||.||:.||||
BPUM_0340___y      1 MKKMFFAIMLGACVALITACGSGASDNANKQSGSKESGDLWKSIQDKGVL     50

BSNT_00642___     48 TVGTEGTYEPFTYHDKDTDKLTGYDVEVITEVAKRLGLKVDFKETQWDSM     97
                     |:||||||.|||:|||.|||||||||||||||||||.||.:|||||||||
BPUM_0340___y     51 TIGTEGTYAPFTFHDKKTDKLTGYDVEVITEVAKRLDLKPEFKETQWDSM    100

BSNT_00642___     98 FAGLNSKRFDVIANQVGKTDREDKYDFSDKYTTSRAVVVTKKDNNDIKSE    147
                     |||||||||||:|||||||.||::|:||||||||:|:||||.||||||..
BPUM_0340___y    101 FAGLNSKRFDVVANQVGKTGRENQYEFSDKYTTSQAIVVTKSDNNDIKKL    150

BSNT_00642___    148 ADVKGKTSAQSLTSNYNKLATNAGAKVEGVEGMAQALQMIQQGRVDMTYN    197
                     :|||||.:|||||||||||||:||||:|||||:||::|:|||||.|:|:|
BPUM_0340___y    151 SDVKGKKAAQSLTSNYNKLATDAGAKIEGVEGLAQSIQLIQQGRADLTFN    200

BSNT_00642___    198 DKLAVLNYLKTSGNKNVKIAFETGDPQSTYFTFRKGSGEVVDQVNKALKE    247
                     ||||||||||||||||:|:||||||||.|||.||||||||||:||.||||
BPUM_0340___y    201 DKLAVLNYLKTSGNKNLKVAFETGDPQETYFAFRKGSGEVVDKVNGALKE    250

BSNT_00642___    248 MKEDGTLSKISKKWFGEDVSK    268
                     ||:||||:|||||||||||:|
BPUM_0340___y    251 MKKDGTLAKISKKWFGEDVTK    271


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