Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00640 and BPUM_0339
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:25
# Commandline: needle
# -asequence pep-align/BSNT_00640___yckJ.1.24716.seq
# -bsequence pep-align/BPUM_0339___yckJ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00640___yckJ-BPUM_0339___yckJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00640___yckJ-BPUM_0339___yckJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00640___yckJ
# 2: BPUM_0339___yckJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 234
# Identity: 179/234 (76.5%)
# Similarity: 208/234 (88.9%)
# Gaps: 4/234 ( 1.7%)
# Score: 961.0
#
#
#=======================================
BSNT_00640___ 1 MFLNNLPALTLGTAIPWDLVQQSFWPILSGGIYYTIPLTILSFIFGMILA 50
.|.:.|||..|||||:||||||::..||||||||.|::||.|:.:|
BPUM_0339___y 1 ----MLQSNTLGVVIPWDLLQQSFWPMVMQGIYYTIPLAIIAFIIGIFIA 46
BSNT_00640___ 51 LITALARMSKVRPLRWVFSVYVSAIRGTPLLVQLFIIFYLFPAFNVTLDP 100
|:||||||||::.|||:||:||||:|||||.||||||||.||.||:||||
BPUM_0339___y 47 LVTALARMSKIKALRWIFSIYVSAVRGTPLFVQLFIIFYFFPTFNITLDP 96
BSNT_00640___ 101 FPSAVIAFSLNVGAYASEIIRASILSVPKGQWEAGYTIGMTHQKTLFRVI 150
:|||:||||||||||||||||||:||||||||||||:|||||:|||.|||
BPUM_0339___y 97 YPSAIIAFSLNVGAYASEIIRASVLSVPKGQWEAGYSIGMTHRKTLVRVI 146
BSNT_00640___ 151 LPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGARNLDQIL 200
||||.|||||||||:||||:|||||||||||||:|||:|||.|.||||||
BPUM_0339___y 147 LPQAVRVSIPPLSNSFISLVKDTSLASQILVAEMFRKSQEIAAANLDQIL 196
BSNT_00640___ 201 VIYIEAAFIYWIICFLLSLVQHVIERRLDRYVAK 234
.||:|||.|||:.||:||||||.||:|||||||:
BPUM_0339___y 197 FIYMEAALIYWVFCFILSLVQHQIEKRLDRYVAR 230
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