Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00639 and BPUM_0338

See DNA alignment / Visit BSNT_00639 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:25
# Commandline: needle
#    -asequence pep-align/BSNT_00639___yckI.1.24716.seq
#    -bsequence pep-align/BPUM_0338___yckI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00639___yckI-BPUM_0338___yckI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00639___yckI-BPUM_0338___yckI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00639___yckI
# 2: BPUM_0338___yckI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     217/247 (87.9%)
# Similarity:   229/247 (92.7%)
# Gaps:           0/247 ( 0.0%)
# Score: 1111.0
# 
#
#=======================================

BSNT_00639___      1 MLTVKGLNKSFGENEILKKIDMKIEKGKVIAILGPSGSGKTTLLRCLNAL     50
                     ||||||||||||||||||.||..|.||:|:||||||||||||:|||||||
BPUM_0338___y      1 MLTVKGLNKSFGENEILKSIDFTINKGQVVAILGPSGSGKTTMLRCLNAL     50

BSNT_00639___     51 EIPNRGELAFDDFSIDFSKKVKQADILKLRRKSGMVFQAYHLFPHRTALE    100
                     ||||.|...|||||||||||.||||:||||||||||||.||||||||.||
BPUM_0338___y     51 EIPNAGSFTFDDFSIDFSKKNKQADLLKLRRKSGMVFQDYHLFPHRTVLE    100

BSNT_00639___    101 NVMEGPVQVQKRNKEEVRKEAIQLLDKVGLKDKMDLYPFQLSGGQQQRVG    150
                     ||||||||||:|.||||||||||||.||||:||.|||||||||||:||||
BPUM_0338___y    101 NVMEGPVQVQRRPKEEVRKEAIQLLQKVGLEDKKDLYPFQLSGGQKQRVG    150

BSNT_00639___    151 IARALAIQPELMLFDEPTSALDPELVGEVLKVIKDLANEGWTMVVVTHEI    200
                     ||||||||||||||||||||||||||||||||:||||.|||||.||||||
BPUM_0338___y    151 IARALAIQPELMLFDEPTSALDPELVGEVLKVMKDLAKEGWTMAVVTHEI    200

BSNT_00639___    201 KFAQEVADEVIFIDGGVIVEQGPPEQIFSAPKEERTQRFLNRILNPL    247
                     |||||||||||||||||||||||||:||..||||||::||||||||:
BPUM_0338___y    201 KFAQEVADEVIFIDGGVIVEQGPPEEIFKRPKEERTKQFLNRILNPV    247


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