Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00639 and BPUM_0338
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:25
# Commandline: needle
# -asequence dna-align/BSNT_00639___yckI.1.24716.seq
# -bsequence dna-align/BPUM_0338___yckI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00639___yckI-BPUM_0338___yckI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00639___yckI-BPUM_0338___yckI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00639___yckI
# 2: BPUM_0338___yckI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 750
# Identity: 563/750 (75.1%)
# Similarity: 563/750 (75.1%)
# Gaps: 12/750 ( 1.6%)
# Score: 2052.0
#
#
#=======================================
BSNT_00639___ 1 ATGCTTACCGTTAAAGGATTAAACAAATCATTCGGTGAAAATGAAATTTT 50
|||||.||.||.|||||.|||||||||||.||.|||||||||||.|||||
BPUM_0338___y 1 ATGCTAACAGTCAAAGGCTTAAACAAATCCTTTGGTGAAAATGAGATTTT 50
BSNT_00639___ 51 AAAAAAGATAGATATGAAGATTGAAAAAGGAAAAGTCATCGCCATACTTG 100
|||...|||.|||.|.|.|||..|.|||||..|.||..|.||.||.||||
BPUM_0338___y 51 AAAGTCGATTGATTTTACGATCAACAAAGGGCAGGTTGTGGCGATTCTTG 100
BSNT_00639___ 101 GGCCTTCAGGTTCAGGGAAAACGACGCTGCTCCGCTGCCTGAACGCTCTG 150
|.||.|||||||||||.|||||.|||.||||.|||||..|.||.||.||.
BPUM_0338___y 101 GTCCATCAGGTTCAGGAAAAACAACGATGCTTCGCTGTTTAAATGCACTT 150
BSNT_00639___ 151 GAGATCCCAAATCGCGGAGAGC----TTGCATTTGATGATTTCTCCATCG 196
||.||.||||||..|| || ||.|.||.|||||||||||.||.|
BPUM_0338___y 151 GAAATTCCAAATGCCG----GCTCCTTTACCTTCGATGATTTCTCGATTG 196
BSNT_00639___ 197 ATTTCTCCAAAAAGGTGAAACAGGCGGATATCCTAAAGCTTCGCCGAAAA 246
||||.||.|||||....|||||.||.|||.|.||.||.||||||||.||.
BPUM_0338___y 197 ATTTTTCTAAAAAAAATAAACAAGCTGATTTGCTCAAACTTCGCCGGAAG 246
BSNT_00639___ 247 TCCGGAATGGTGTTTCAGGCGTATCACCTGTTCCCGCACCGCACAGCCCT 296
||.||.|||||||||||.|..|||||||||||.|||||.||.||.|..||
BPUM_0338___y 247 TCAGGCATGGTGTTTCAAGATTATCACCTGTTTCCGCATCGTACTGTTCT 296
BSNT_00639___ 297 CGAAAACGTGATGGAGGGCCCTGTTCAGGTGCAAAAACGGAACAAAGAGG 346
.||.||.||||||||.||.||.||.||.||.||....|||...|||||.|
BPUM_0338___y 297 TGAGAATGTGATGGAAGGTCCAGTCCAAGTTCAGCGCCGGCCAAAAGAAG 346
BSNT_00639___ 347 AAGTCAGAAAAGAAGCGATTCAGCTTCTTGATAAAGTCGGA-TTGAAGGA 395
|.||..|||||||||||||||||||.||..|.||.||.||| ||| ||||
BPUM_0338___y 347 AGGTGCGAAAAGAAGCGATTCAGCTCCTGCAAAAGGTAGGACTTG-AGGA 395
BSNT_00639___ 396 CAAAATGGATTTATATCCATTCCAGCTTTCCGGCGGACAGCAGCAGCGCG 445
.||||..|||||.|||||.||||||||.||.|||||.||..||||.||.|
BPUM_0338___y 396 TAAAAAAGATTTGTATCCCTTCCAGCTGTCAGGCGGTCAAAAGCAACGTG 445
BSNT_00639___ 446 TCGGCATCGCCCGCGCACTGGCGATTCAGCCTGAGCTCATGCTGTTTGAC 495
|||||||.|||||.|||||.||.|||||.||.|||||||||||.|||||.
BPUM_0338___y 446 TCGGCATTGCCCGTGCACTTGCTATTCAACCAGAGCTCATGCTTTTTGAT 495
BSNT_00639___ 496 GAACCGACCTCAGCGCTTGATCCCGAGCTTGTCGGAGAGGTGCTGAAGGT 545
|||||.|||||.||.|||||.||.|||||||||||.||.||..|.|||||
BPUM_0338___y 496 GAACCAACCTCTGCACTTGACCCTGAGCTTGTCGGGGAAGTCTTAAAGGT 545
BSNT_00639___ 546 TATCAAGGACTTGGCCAATGAAGGCTGGACCATGGTCGTCGTGACCCACG 595
.||.|||||.||.||.||.||||||||||||||||..|||||.||.||.|
BPUM_0338___y 546 CATGAAGGATTTAGCGAAAGAAGGCTGGACCATGGCGGTCGTCACACATG 595
BSNT_00639___ 596 AAATCAAGTTCGCGCAGGAAGTTGCGGATGAAGTCATCTTCATCGACGGC 645
||||||||||.||.||.|||||.||.||.|||||.||.||.||.||.|||
BPUM_0338___y 596 AAATCAAGTTTGCCCAAGAAGTGGCAGACGAAGTGATTTTTATTGATGGC 645
BSNT_00639___ 646 GGCGTTATCGTGGAGCAGGGACCGCCGGAGCAAATTTTC-TCCGCACCAA 694
|||||.|||||.||.||.||.||.||.||..||||.||| ..|| |||||
BPUM_0338___y 646 GGCGTCATCGTCGAACAAGGTCCTCCAGAAGAAATCTTCAAACG-ACCAA 694
BSNT_00639___ 695 AAGAAGAGCGGACACAGCGGTTCTTGAACCGGATTTTGAACCCGCTGTAA 744
|.|||||.||.|||.|.|..|||||.|||||||||||.||.||..|.|.|
BPUM_0338___y 695 AGGAAGAACGAACAAAACAATTCTTAAACCGGATTTTAAATCCAGTATGA 744
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