Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00610 and BPUM_0312

See DNA alignment / Visit BSNT_00610 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:24
# Commandline: needle
#    -asequence pep-align/BSNT_00610___nucA.1.24716.seq
#    -bsequence pep-align/BPUM_0312___nucA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00610___nucA-BPUM_0312___nucA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00610___nucA-BPUM_0312___nucA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00610___nucA
# 2: BPUM_0312___nucA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 149
# Identity:      91/149 (61.1%)
# Similarity:   119/149 (79.9%)
# Gaps:           7/149 ( 4.7%)
# Score: 496.5
# 
#
#=======================================

BSNT_00610___      1 MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETIAFP     50
                         ..::|.|||:::|:...|.|.|:.:  .:.|:|:.: .||:||.||
BPUM_0312___n      1 ----MKLLKIILLLLLIVVGVATGYIQLE--QSKQETTNS-SYDKTIHFP     43

BSNT_00610___     51 SDRYPETAKHIKDAINEGHSEVCTIDRDGAEERREQSLKDVPSKKGYDRD    100
                     |||||||||||::||:||||.||||||:.::|:|||||:..|:|:|||||
BPUM_0312___n     44 SDRYPETAKHIEEAIDEGHSSVCTIDREHSDEQREQSLQGTPTKRGYDRD     93

BSNT_00610___    101 EWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ    149
                     |||||||||||.||||:||||:|||||||||||||:|.||||::.|.|.
BPUM_0312___n     94 EWPMAMCKEGGTGASVKYISPSDNRGAGSWVGHQLSDDPDGTRIQFIID    142


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.