Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_00612 and BPUM_0311

See DNA alignment / Visit BSNT_00612 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:24
# Commandline: needle
#    -asequence pep-align/BSNT_00612.1.24716.seq
#    -bsequence pep-align/BPUM_0311___tlpC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00612-BPUM_0311___tlpC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00612-BPUM_0311___tlpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00612
# 2: BPUM_0311___tlpC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 566
# Identity:     163/566 (28.8%)
# Similarity:   226/566 (39.9%)
# Gaps:         271/566 (47.9%)
# Score: 837.0
# 
#
#=======================================

BSNT_00612         1 MLIKRFKMKLGTKILCLVFVVILLFSASVGTVMLKEITENMKQMATEKAK     50
                      :.|:.|::||.|||.:...||::|||.||.|:.:|:|||:|.|||||||
BPUM_0311___t      1 -MKKKGKLRLGAKILLIFLSVIIIFSAIVGYVVNREMTENIKHMATEKAK     49

BSNT_00612        51 GDLALSSTYIDDVISGDWQVKNNKLYKGQTQINGNEELVDLLGEKTGDTI    100
                     |||.|...|:|:.::|.||:|:.|||||.||||.::.|||.|.:.|.|||
BPUM_0311___t     50 GDLKLGYAYLDEKVAGSWQIKDGKLYKGNTQINDHDTLVDHLAKYTDDTI     99

BSNT_00612       101 TIFQGDTRVATNVMKNGERAVGTQASSEVIAAVLKKGKCFYGQADVAGSS    150
                     |||||:||||||||.||:||||||.|.||.|.||.:|:.:||.|:|||..
BPUM_0311___t    100 TIFQGNTRVATNVMLNGKRAVGTQVSPEVKATVLDQGENYYGTANVAGKD    149

BSNT_00612       151 YQTAYMPLKDQNGSIIGMLYTGANQSILASLTQSLFTQFAIVLVIVIMLS    200
                     |||||||:|:..|..||:.||||||.:::.:.||.:.||.|||::.::::
BPUM_0311___t    150 YQTAYMPIKNDAGETIGIFYTGANQGMISQMLQSFYIQFFIVLLLSLIVA    199

BSNT_00612       201 VILVLVFTRKINKRLNALKSAFESAGNGDMTIEVSDKTGDELSELSVYYN    250
                     ||::.:||::|..||..:.||.:|||.|::||.|:|.||||||:|:.::|
BPUM_0311___t    200 VIIISIFTKRIQTRLKRMASAIKSAGEGNLTINVTDTTGDELSDLADHFN    249

BSNT_00612       251 KMRMKLNDTIQTVQQSALQLASASQQLSAGAEETNQASEKITEAVQ----    296
                     |||.|||.||..|..::..:|::|:||||.||||:.||||||.::|    
BPUM_0311___t    250 KMREKLNHTILNVMNTSELVATSSEQLSASAEETSAASEKITHSIQEVAH    299

BSNT_00612       296 --------------------------------------------------    296
                                                                       
BPUM_0311___t    300 SSEEQSAQMTTSEHTMIQVSNELANITDNAGQMASRSQYAQEMALKGVQN    349

BSNT_00612       296 --------------------------------------------------    296
                                                                       
BPUM_0311___t    350 IGEVNSQMTSIAKSIEENGTAIQALETRSAEIDHISHVITDIANQTNLLA    399

BSNT_00612       296 --------------------------------------------------    296
                                                                       
BPUM_0311___t    400 LNAAIEAARAGEHGKGFAVVADEVRKLAEESQASSNMISHLISEIQKEMT    449

BSNT_00612       296 --------------------------------------------------    296
                                                                       
BPUM_0311___t    450 YSTSAIKRVREEAAQGTVLISHTEESFIDIQQSMREMADGIKHLSSASQK    499

BSNT_00612       296 --------------------------------------------------    296
                                                                       
BPUM_0311___t    500 IAAYTNDAKQSFATITEGVKLTSEHSQQVAGLTEEQFAAMEEVTASSEAL    549

BSNT_00612       296 ----------------    296
                                     
BPUM_0311___t    550 AHLAGDLKTMVSQFHI    565


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.