Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00612 and BPUM_0311
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:24
# Commandline: needle
# -asequence pep-align/BSNT_00612.1.24716.seq
# -bsequence pep-align/BPUM_0311___tlpC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00612-BPUM_0311___tlpC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00612-BPUM_0311___tlpC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00612
# 2: BPUM_0311___tlpC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 566
# Identity: 163/566 (28.8%)
# Similarity: 226/566 (39.9%)
# Gaps: 271/566 (47.9%)
# Score: 837.0
#
#
#=======================================
BSNT_00612 1 MLIKRFKMKLGTKILCLVFVVILLFSASVGTVMLKEITENMKQMATEKAK 50
:.|:.|::||.|||.:...||::|||.||.|:.:|:|||:|.|||||||
BPUM_0311___t 1 -MKKKGKLRLGAKILLIFLSVIIIFSAIVGYVVNREMTENIKHMATEKAK 49
BSNT_00612 51 GDLALSSTYIDDVISGDWQVKNNKLYKGQTQINGNEELVDLLGEKTGDTI 100
|||.|...|:|:.::|.||:|:.|||||.||||.::.|||.|.:.|.|||
BPUM_0311___t 50 GDLKLGYAYLDEKVAGSWQIKDGKLYKGNTQINDHDTLVDHLAKYTDDTI 99
BSNT_00612 101 TIFQGDTRVATNVMKNGERAVGTQASSEVIAAVLKKGKCFYGQADVAGSS 150
|||||:||||||||.||:||||||.|.||.|.||.:|:.:||.|:|||..
BPUM_0311___t 100 TIFQGNTRVATNVMLNGKRAVGTQVSPEVKATVLDQGENYYGTANVAGKD 149
BSNT_00612 151 YQTAYMPLKDQNGSIIGMLYTGANQSILASLTQSLFTQFAIVLVIVIMLS 200
|||||||:|:..|..||:.||||||.:::.:.||.:.||.|||::.::::
BPUM_0311___t 150 YQTAYMPIKNDAGETIGIFYTGANQGMISQMLQSFYIQFFIVLLLSLIVA 199
BSNT_00612 201 VILVLVFTRKINKRLNALKSAFESAGNGDMTIEVSDKTGDELSELSVYYN 250
||::.:||::|..||..:.||.:|||.|::||.|:|.||||||:|:.::|
BPUM_0311___t 200 VIIISIFTKRIQTRLKRMASAIKSAGEGNLTINVTDTTGDELSDLADHFN 249
BSNT_00612 251 KMRMKLNDTIQTVQQSALQLASASQQLSAGAEETNQASEKITEAVQ---- 296
|||.|||.||..|..::..:|::|:||||.||||:.||||||.::|
BPUM_0311___t 250 KMREKLNHTILNVMNTSELVATSSEQLSASAEETSAASEKITHSIQEVAH 299
BSNT_00612 296 -------------------------------------------------- 296
BPUM_0311___t 300 SSEEQSAQMTTSEHTMIQVSNELANITDNAGQMASRSQYAQEMALKGVQN 349
BSNT_00612 296 -------------------------------------------------- 296
BPUM_0311___t 350 IGEVNSQMTSIAKSIEENGTAIQALETRSAEIDHISHVITDIANQTNLLA 399
BSNT_00612 296 -------------------------------------------------- 296
BPUM_0311___t 400 LNAAIEAARAGEHGKGFAVVADEVRKLAEESQASSNMISHLISEIQKEMT 449
BSNT_00612 296 -------------------------------------------------- 296
BPUM_0311___t 450 YSTSAIKRVREEAAQGTVLISHTEESFIDIQQSMREMADGIKHLSSASQK 499
BSNT_00612 296 -------------------------------------------------- 296
BPUM_0311___t 500 IAAYTNDAKQSFATITEGVKLTSEHSQQVAGLTEEQFAAMEEVTASSEAL 549
BSNT_00612 296 ---------------- 296
BPUM_0311___t 550 AHLAGDLKTMVSQFHI 565
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