Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00602 and BPUM_0306

See DNA alignment / Visit BSNT_00602 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:23
# Commandline: needle
#    -asequence pep-align/BSNT_00602___yckD.1.24716.seq
#    -bsequence pep-align/BPUM_0306___yckD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00602___yckD-BPUM_0306___yckD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00602___yckD-BPUM_0306___yckD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00602___yckD
# 2: BPUM_0306___yckD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 118
# Identity:      47/118 (39.8%)
# Similarity:    71/118 (60.2%)
# Gaps:          17/118 (14.4%)
# Score: 219.0
# 
#
#=======================================

BSNT_00602___      1 MKRIT-INIITMFIATTVISLTGTAEAAEKQQQPPAN-VTLTDQQKKEVE     48
                     ||||: :.|:::.:.:.....|...|..:.:::|..: |.||.:|:|::|
BPUM_0306___y      1 MKRISGLFILSVMLLSGFYMETAHGETPQMEKRPVTHQVKLTTEQQKQIE     50

BSNT_00602___     49 QLEAEILKKRKDVISKYVQYGVLPKERGEHIKNHLDKHFEMMKQNGFV--     96
                     .||.:||.|||:||.||||||||.||:|.||...:|:|:..:|.||||  
BPUM_0306___y     51 TLEQQILSKRKEVIEKYVQYGVLTKEQGTHITKRMDEHYNHLKNNGFVPL    100

BSNT_00602___     97 ---PKHH-PHPHKFEKRH    110
                        |:|| |         
BPUM_0306___y    101 LKKPQHHRP---------    109


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