Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00599 and BPUM_0305

See DNA alignment / Visit BSNT_00599 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:23
# Commandline: needle
#    -asequence pep-align/BSNT_00599___yckB.1.24716.seq
#    -bsequence pep-align/BPUM_0305___yckB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00599___yckB-BPUM_0305___yckB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00599___yckB-BPUM_0305___yckB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00599___yckB
# 2: BPUM_0305___yckB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     218/290 (75.2%)
# Similarity:   250/290 (86.2%)
# Gaps:           3/290 ( 1.0%)
# Score: 1135.0
# 
#
#=======================================

BSNT_00599___      1 MKSFKQSKAV-IFSFTMAFFLILAACSGKNEADSKDTGWEQIKDKGKIVV     49
                     |..|...|:: :.....||.|:|:|||....:.|.|:.|::|:.||||||
BPUM_0305___y      1 MSRFYHRKSIWVMLVVSAFILVLSACSQSGSSQSGDSKWDKIQKKGKIVV     50

BSNT_00599___     50 ATSGTLYPTSYHDTDSGSDKLTGYEVEVVREAAKRLGLKVEFKEMGIDGM     99
                     ||||||||||||||.:|.|:|||||||||:||.|||.:||||||||.|||
BPUM_0305___y     51 ATSGTLYPTSYHDTANGKDQLTGYEVEVVKEAFKRLDVKVEFKEMGYDGM    100

BSNT_00599___    100 LTAVNSGQVDAAANDIDVTKDREKKFAFSTPYKYSYGTAIVRKDDLSGIK    149
                     |:|:|||||||||||||:|.||:.||||||||||||||||||||||||||
BPUM_0305___y    101 LSAINSGQVDAAANDIDITDDRKDKFAFSTPYKYSYGTAIVRKDDLSGIK    150

BSNT_00599___    150 TLKDLKGKKAAGAATTVYMEVARKYGAKEVIYDNATNEQYLKDVANGRTD    199
                     ||||||||||||||||:||:||||||||||||||||||||||||||||||
BPUM_0305___y    151 TLKDLKGKKAAGAATTIYMDVARKYGAKEVIYDNATNEQYLKDVANGRTD    200

BSNT_00599___    200 VILNDYYLQTLALAAFPDLNITIHPDIKYMPNKQALVMKKSNEALQKKMN    249
                     |||||||||||||||||.||||||||:|||||:|..||||.|..|||::|
BPUM_0305___y    201 VILNDYYLQTLALAAFPKLNITIHPDLKYMPNEQGFVMKKDNTELQKELN    250

BSNT_00599___    250 EALKEMSKDGSLTKLSKQFFNKADVSKKIDADVQDVDL--    287
                     ..||:|.|||::.|:|::|||.|||||||||||:|||:  
BPUM_0305___y    251 GVLKDMKKDGTMKKISEKFFNHADVSKKIDADVEDVDISK    290


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