Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00917 and BPUM_0303
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:37
# Commandline: needle
# -asequence pep-align/BSNT_00917___ydfA.1.24716.seq
# -bsequence pep-align/BPUM_0303___arsB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00917___ydfA-BPUM_0303___arsB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00917___ydfA-BPUM_0303___arsB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00917___ydfA
# 2: BPUM_0303___arsB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 435
# Identity: 299/435 (68.7%)
# Similarity: 366/435 (84.1%)
# Gaps: 3/435 ( 0.7%)
# Score: 1596.0
#
#
#=======================================
BSNT_00917___ 1 MTSMILAVFIFLLTLVLVIWQPKNLSIGWSACGGAVLALIAGVVNFHDVL 50
|.::.||:.||:||||||||||..|:|||||||||:|||..|||:..||.
BPUM_0303___a 1 MGAVTLAILIFILTLVLVIWQPGRLTIGWSACGGAILALAFGVVHLGDVW 50
BSNT_00917___ 51 TVTGIVWNATLAFVAIILISLILDNIGFFEWAALHMAKAAKGNGVRMFVY 100
.||.||||||.||:.||:||||||.|||||||||||||||||||||||:|
BPUM_0303___a 51 EVTQIVWNATFAFIGIIMISLILDEIGFFEWAALHMAKAAKGNGVRMFIY 100
BSNT_00917___ 101 VSLLGAIVAALFANDGAALILTPIVLAMVRALHFNEKLVFPFIIASGFIA 150
::||||:|||.|||||||||||||||::||||:.:|:::.||::||||||
BPUM_0303___a 101 LTLLGAVVAAFFANDGAALILTPIVLSVVRALNLDERMILPFVMASGFIA 150
BSNT_00917___ 151 DTTSLPLVVSNLVNIVSADYFHITFIDYASRMVVPYLFSLLASIIVLYLF 200
||||||.|:||||||||||||||.|::|.:.|.||.|.||.||::|||:|
BPUM_0303___a 151 DTTSLPFVISNLVNIVSADYFHIGFLEYTANMFVPNLVSLGASMLVLYVF 200
BSNT_00917___ 201 FRKSIPKRYDLTEVKKPVEAIKDQNMFRLSWYILGLLLIGYFASEFFSIP 250
:||.|||.|||::.|:|..||:|..|||||||:||.||:|||..|...||
BPUM_0303___a 201 YRKLIPKTYDLSQAKEPASAIRDIRMFRLSWYVLGCLLVGYFGGELIGIP 250
BSNT_00917___ 251 VSVVAGSIAIIFLIAAQKSPAVHTKKVVKEAPWAIVFFSIGMYVVVYGVR 300
||::.|.||::||..|::||.|.||:|:|||||:||||||||||||||::
BPUM_0303___a 251 VSIIVGGIALVFLWLARRSPQVATKRVIKEAPWSIVFFSIGMYVVVYGLK 300
BSNT_00917___ 301 NAGLTDVLSDVIQAAADQGLFAGTIGMGFIAAILSSIMNNLPTVMIDALA 350
|.|||::|:..|:..|..||.|||:.||.:||:|||:|||||||:|||:|
BPUM_0303___a 301 NVGLTEILAAWIEQGASHGLLAGTMFMGVLAAVLSSVMNNLPTVLIDAIA 350
BSNT_00917___ 351 IAGTDTHGMMREALIYANVIGSDLGPKITPIGSLATLLWLHVLSHKGMKI 400
|..|||.|:||:.|||||||||:||||:|||||||||||||||..||:.|
BPUM_0303___a 351 IGHTDTAGVMRDGLIYANVIGSNLGPKMTPIGSLATLLWLHVLKKKGVHI 400
BSNT_00917___ 401 SWGTYFKTGIILTIPTLLITLVGLYIWLLIIHSCF 435
|||.|.|.|||||||||::||:|||:||.:||
BPUM_0303___a 401 SWGAYMKAGIILTIPTLILTLLGLYVWLWLIH--- 432
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