Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00564 and BPUM_0297

See DNA alignment / Visit BSNT_00564 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:22
# Commandline: needle
#    -asequence pep-align/BSNT_00564___cah.1.24716.seq
#    -bsequence pep-align/BPUM_0297___cah.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00564___cah-BPUM_0297___cah.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00564___cah-BPUM_0297___cah.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00564___cah
# 2: BPUM_0297___cah
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity:     238/318 (74.8%)
# Similarity:   271/318 (85.2%)
# Gaps:           0/318 ( 0.0%)
# Score: 1283.0
# 
#
#=======================================

BSNT_00564___      1 MQLFDLPLDQLQTYKPEKTAPKDFSEFWKLSLEELAKVQAEPDLQPVDYP     50
                     |||||||||.|:.|||:|||..|||:|||.|||||.:|:||..|:|.|||
BPUM_0297___c      1 MQLFDLPLDDLKKYKPKKTARPDFSDFWKASLEELNQVEAELALEPYDYP     50

BSNT_00564___     51 ADGVKVYRLTYKSFGNARITGWYAVPDKEGPHPAMVKYHGYNASYDGEIH    100
                     ..|||||||||:|||::||.|||||||:.|.|||:|.:|||||||||.||
BPUM_0297___c     51 VKGVKVYRLTYQSFGHSRIEGWYAVPDQAGLHPALVHFHGYNASYDGGIH    100

BSNT_00564___    101 EMVNWALHGYAAFGMLVRGQQSSEDTSISPHGHALGWMTKGILDKDTYYY    150
                     ::|||||||||.||||||||..|||.:::|.|.||||||||||.|:||||
BPUM_0297___c    101 DIVNWALHGYATFGMLVRGQGGSEDKTVTPGGQALGWMTKGILSKETYYY    150

BSNT_00564___    151 RGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIPKAA    200
                     |||||||||||:||.||.||||.||||.||||||.|.:||||||||||..
BPUM_0297___c    151 RGVYLDAVRALDVIQSFPEVDEHRIGVVGGSQGGALAVAAAALSDIPKVV    200

BSNT_00564___    201 VADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDI    250
                     |||||||||||||:|||||||||||||:||||..|..|.:|.:||||||:
BPUM_0297___c    201 VADYPYLSNFERAVDVALEQPYLEINSYFRRNSDPAVEEKAFETLSYFDL    250

BSNT_00564___    251 MNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETEKELKVYRYFGHEY    300
                     :|||..|..|.||:|||||::||||||||.||||||:|:|||||||||||
BPUM_0297___c    251 INLAGWVNQPTLMAIGLIDQITPPSTVFAVYNHLETDKDLKVYRYFGHEY    300

BSNT_00564___    301 IPAFQTEKLAFFKQHLKG    318
                     |.|||||||||.::||..
BPUM_0297___c    301 ISAFQTEKLAFLQKHLTN    318


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