Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02285 and BPUM_0296

See DNA alignment / Visit BSNT_02285 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:44
# Commandline: needle
#    -asequence pep-align/BSNT_02285___ykrU.1.24716.seq
#    -bsequence pep-align/BPUM_0296___ykrU.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02285___ykrU-BPUM_0296___ykrU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02285___ykrU-BPUM_0296___ykrU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02285___ykrU
# 2: BPUM_0296___ykrU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 263
# Identity:     125/263 (47.5%)
# Similarity:   172/263 (65.4%)
# Gaps:           6/263 ( 2.3%)
# Score: 622.0
# 
#
#=======================================

BSNT_02285___      1 MKWTISCLQFDISYGKTSENIKKAEFFIEKE-SKHADVLVLPELWTTGYD     49
                     ||  |:.:|.|:..|:...|.:|||.|:|:. .:..|:::|||:|.|||.
BPUM_0296___y      1 MK--IALVQMDVQIGEPDVNFQKAEAFLEEAIRQQPDLIILPEMWNTGYA     48

BSNT_02285___     50 LANLDELADKDGRSAQSWLKKTAKKHGVHIVAGSVAVRKNSD--VYNTMY     97
                     |...|:|||.:|...:......|.||.|.::||||..::..|  :.||||
BPUM_0296___y     49 LEQADQLADVNGERTKQLFSSFAHKHQVILIAGSVLNKRTEDEKITNTMY     98

BSNT_02285___     98 IADKEGQIIKEYRKAHLFQLMDEHLYLSAGSEDGYFELD-GVKSSGLICY    146
                     |.:::|:::.:|.|.|||:|||||.||:||.:...|:.| .||...:|||
BPUM_0296___y     99 IFNRQGELLVDYDKIHLFRLMDEHNYLTAGDQLCLFDYDEDVKIGAMICY    148

BSNT_02285___    147 DIRFPEWIRKHTTKGANVLFISAEWPLPRLDHWKSLLIARAIENQCFVAA    196
                     |:|||:..|....|||.||..:|:||..|:|||:|||||||||||.|:.|
BPUM_0296___y    149 DLRFPQLSRTLVNKGAKVLINTAQWPSARVDHWRSLLIARAIENQSFMIA    198

BSNT_02285___    197 CNCTGSNPDNEFAGHSLIIDPWGRVLAEGGREEGIVRAEIDLQESAEVRE    246
                     .|.||::.|.||.|||::|||.||:|.|...||.|...:||||...|||:
BPUM_0296___y    199 VNRTGTSRDTEFPGHSMVIDPLGRILLETNHEEDIYYGDIDLQLVDEVRQ    248

BSNT_02285___    247 SIPVFNDIRKDLY    259
                     .|||..|.|.|:|
BPUM_0296___y    249 QIPVMTDQRLDIY    261


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