Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00563 and BPUM_0295
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:22
# Commandline: needle
# -asequence pep-align/BSNT_00563___ycgK.1.24716.seq
# -bsequence pep-align/BPUM_0295___ycgK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00563___ycgK-BPUM_0295___ycgK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00563___ycgK-BPUM_0295___ycgK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00563___ycgK
# 2: BPUM_0295___ycgK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 328
# Identity: 156/328 (47.6%)
# Similarity: 219/328 (66.8%)
# Gaps: 25/328 ( 7.6%)
# Score: 796.5
#
#
#=======================================
BSNT_00563___ 1 --MDIKVMEYAVEIARRQSFTKAAEHLHIAQPSLSQQIKKLEAELRLTLF 48
:||::|||.:|:.|::|||||||.||||||||||||||||.||...||
BPUM_0295___y 1 MKVDIRMMEYVMEVYRQKSFTKAAEELHIAQPSLSQQIKKLEEELDTPLF 50
BSNT_00563___ 49 HRSHGSVTLTPHGRRFIEKAEDIIRSRDDLLREMQERSQGIGHKLSIGIP 98
.|.:|.||.||.|.|||::||.|::.:|||||||.|.:..:|.:|:||.|
BPUM_0295___y 51 IRKYGQVTPTPQGSRFIKRAESILKEKDDLLREMGEAAYEVGKELNIGAP 100
BSNT_00563___ 99 AVTGRYLFPPLLRQFLARYPHVEVQLVEKDPVSLEEMTAKGEVDLSVLSL 148
||||.|:.|.||:.|...||||.|:|:|:.|..||::...|::||::||:
BPUM_0295___y 101 AVTGGYVLPSLLKTFCQTYPHVHVRLIEESPRELEKLLLAGQLDLAILSM 150
BSNT_00563___ 149 PIEDERLSITPLLTEPIVLAVPKEKQRWMPPELVALIEKALEGKEGRQPC 198
|:|.|.|....:||||::||||...|.|:..||..:|. :..::..
BPUM_0295___y 151 PVEHESLKTKHMLTEPLLLAVPPSAQPWLQAELNDIIH-----QRDQKGT 195
BSNT_00563___ 199 VPLDMVRNVPFILLKEGFGFRRTVLDLCAESGFKPNAAFKTSHIETAQSL 248
||..::.:..||:||||:|||:.|.:||...||:|...|:||||:|||:|
BPUM_0295___y 196 VPFRLLEDASFIMLKEGYGFRQVVTELCHHHGFQPKITFETSHIQTAQAL 245
BSNT_00563___ 249 VANGLGVTMAPNMVRRDKDPGVIYLSIQSAPSRTLVFVFLKNRYVSLTAQ 298
|.||||||:.|.||.:::...|.||.|.|:|:|||||.:::.||::..||
BPUM_0295___y 246 VKNGLGVTVVPKMVAQEERNEVTYLKIDSSPTRTLVFAYVEERYLTKAAQ 295
BSNT_00563___ 299 AFMEL--TRESLKQTFDEGCLGNKDENI 324
|.|:| .:|:.
BPUM_0295___y 296 ALMDLYQNQENT---------------- 307
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