Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00555 and BPUM_0289

See DNA alignment / Visit BSNT_00555 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:21
# Commandline: needle
#    -asequence pep-align/BSNT_00555___nadE.1.24716.seq
#    -bsequence pep-align/BPUM_0289___nadE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00555___nadE-BPUM_0289___nadE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00555___nadE-BPUM_0289___nadE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00555___nadE
# 2: BPUM_0289___nadE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity:     219/273 (80.2%)
# Similarity:   246/273 (90.1%)
# Gaps:           1/273 ( 0.4%)
# Score: 1147.0
# 
#
#=======================================

BSNT_00555___      1 MSMQEKIMRELHVKPSIDPKQEIEDRVNFLKQYVKKTGAKGFVLGISGGQ     50
                     ||:|:||.:||||:||||||||||.||.|||.|:||||||||||||||||
BPUM_0289___n      1 MSLQKKISQELHVQPSIDPKQEIEKRVGFLKDYLKKTGAKGFVLGISGGQ     50

BSNT_00555___     51 DSTLAGRLAQLAVESIREEG-GDAQFIAVRLPHGTQQDEDDAQLALKFIK     99
                     ||||||||||||...:|:|| .||.|||||||||.||||.||||||.||:
BPUM_0289___n     51 DSTLAGRLAQLAASELRQEGKEDAVFIAVRLPHGVQQDEGDAQLALSFIQ    100

BSNT_00555___    100 PDKSWKFDIKSTVSAFSDQYQQETGDQLTDFNKGNVKARTRMIAQYAIGG    149
                     ||||||:||...|:|||:|||::||..|:||||||||||.|||||||:||
BPUM_0289___n    101 PDKSWKYDIAPAVTAFSEQYQKDTGGPLSDFNKGNVKARMRMIAQYAVGG    150

BSNT_00555___    150 QEGLLVLGTDHAAEAVTGFFTKYGDGGADLLPLTGLTKRQGRTLLKELGA    199
                     :|||||:||||||||||||||||||||||:|||||||||||||||:.|.|
BPUM_0289___n    151 EEGLLVIGTDHAAEAVTGFFTKYGDGGADVLPLTGLTKRQGRTLLEALQA    200

BSNT_00555___    200 PERLYLKEPTADLLDEKPQQSDETELGISYDEIDDYLEGKEVSAKVSEAL    249
                     |||||||:|||||||:||||:|||||||:|:|||||||||.||.:..||:
BPUM_0289___n    201 PERLYLKKPTADLLDDKPQQTDETELGITYNEIDDYLEGKPVSEQAVEAI    250

BSNT_00555___    250 EKRYSMTEHKRQVPASMFDDWWK    272
                     ||||..:||||||||||||||||
BPUM_0289___n    251 EKRYVQSEHKRQVPASMFDDWWK    273


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