Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00545 and BPUM_0286

See DNA alignment / Visit BSNT_00545 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:21
# Commandline: needle
#    -asequence pep-align/BSNT_00545___ycgG.1.24716.seq
#    -bsequence pep-align/BPUM_0286___yqcI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00545___ycgG-BPUM_0286___yqcI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00545___ycgG-BPUM_0286___yqcI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00545___ycgG
# 2: BPUM_0286___yqcI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     139/261 (53.3%)
# Similarity:   176/261 (67.4%)
# Gaps:          13/261 ( 5.0%)
# Score: 760.0
# 
#
#=======================================

BSNT_00545___      1 MRWINGEWDLHQKFSGTYSGELPEWQRIAFELLAETLGDDADTFPCIPGR     50
                     |..:..:..|.|...     .|.||::.||.|..|.:||:||||||:|||
BPUM_0286___y      1 MAQLYAKSCLDQNLR-----SLEEWKQDAFTLFGEMVGDEADTFPCVPGR     45

BSNT_00545___     51 QAFLTDQLRIAFAGDPRENRTAEELAPLLAEYGKISRDTGKYASLVVLFD    100
                     |.|..|.||..|.||||:....||||.||.||...:::||:|||.:..|:
BPUM_0286___y     46 QGFFLDHLRYGFVGDPRKEEAVEELAQLLREYQSCAKETGQYASFICFFE     95

BSNT_00545___    101 TPEDLAEHYSIEAYEELFWRFLNRLSHQDEKEWPEDIPADPEHYKWEFCF    150
                     ||:||.|. |||.:|:.||..|.||..:||..||||||.|..|::||:||
BPUM_0286___y     96 TPQDLKES-SIEEFEQQFWSLLQRLHQKDEVPWPEDIPLDTHHHEWEYCF    144

BSNT_00545___    151 DGEPYFLLCATPAHEARKSRSFPFFMITFQPRWVFEDLNGSTAFGRNMSR    200
                     .||.||:||:||||:.||||.||:.::.||||||||.|||||.||:.||:
BPUM_0286___y    145 HGEAYFILCSTPAHKLRKSRHFPYVLMAFQPRWVFEKLNGSTKFGQKMSQ    194

BSNT_00545___    201 LIRSRLEAYDQAPIHPQLGWYGGKDNREWKQYFLRDDEKQ---VSKCPFS    247
                     |:|.||:|||:..:||.|.|||...|.|||||||.|:|.:   .:||||:
BPUM_0286___y    195 LVRKRLKAYDEVGVHPSLKWYGDPTNHEWKQYFLPDEEAEKPASAKCPFT    244

BSNT_00545___    248 YLKNMFNKMK-    257
                     .||||   || 
BPUM_0286___y    245 ALKNM---MKL    252


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.