Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01794 and BPUM_0279
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:17
# Commandline: needle
# -asequence pep-align/BSNT_01794___yhjM.1.24716.seq
# -bsequence pep-align/BPUM_0279___yhjM.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01794___yhjM-BPUM_0279___yhjM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01794___yhjM-BPUM_0279___yhjM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01794___yhjM
# 2: BPUM_0279___yhjM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 329
# Identity: 203/329 (61.7%)
# Similarity: 254/329 (77.2%)
# Gaps: 0/329 ( 0.0%)
# Score: 1059.0
#
#
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BSNT_01794___ 1 MPTIDEIAKLCNVSKTTVSRVLNNHPYVSKEKRDMILKAINELDYTPNYL 50
|.||.||||.|.||.||||||||:|||||:|||.:||:.:.|::|||:..
BPUM_0279___y 1 MCTIYEIAKRCGVSTTTVSRVLNHHPYVSEEKRQLILQVMKEMEYTPSSA 50
BSNT_01794___ 51 ARNFRRNKTQTIALSVPSIDHPFFAQLIKGVSHEALFKNYKVIVFQTFYD 100
||..|.::|:|||:|||::|||||||||||:|.|||.:.||.||.||||.
BPUM_0279___y 51 ARTLRSHQTKTIAVSVPAVDHPFFAQLIKGISKEALDQGYKAIVLQTFYQ 100
BSNT_01794___ 101 KQTELELLELLKHKEVDGIILGTLENEWDQISPFLKYGPILLCNEYHHSA 150
:..|||.|:|||.:||||:|||.|||.|::|.|||..|||::.||||.:|
BPUM_0279___y 101 ESLELEGLQLLKRREVDGVILGALENPWEKIEPFLTNGPIVMANEYHQTA 150
BSNT_01794___ 151 DITIIGYDEFEATYMGVVHLIERGHKKIGFCFDTPYSEAQCQRKEGYLKA 200
||.||||||.||.|..|.:||:.|.|.|||||||..||||.|||:|||.|
BPUM_0279___y 151 DIPIIGYDEREAAYKAVDYLIQSGRKSIGFCFDTESSEAQKQRKQGYLDA 200
BSNT_01794___ 201 LQDYDLHHRSEWIFGEMFNIEDGFRVFHKIKDLKDRPSAIFTGNDQVAAG 250
|..:.|....:|:|||.|.||||||:...|.|:|:.|.||||||||||||
BPUM_0279___y 201 LSAHGLPLHDDWLFGEAFTIEDGFRLMDIIHDMKNAPDAIFTGNDQVAAG 250
BSNT_01794___ 251 IIKQAMKNGFKVPEDLAVIGFDNQLICQVVTPTITTIDIPVIELGQQAVL 300
:||||:..|:.:|:||||||:|||.||:|..|||||||||::||||::|.
BPUM_0279___y 251 LIKQAISYGYHIPKDLAVIGYDNQDICEVTAPTITTIDIPIVELGQRSVQ 300
BSNT_01794___ 301 KIIESISGNATLNRRIIKLPTKLIIREST 329
::||.:.....|.|..|:|||:|:.||||
BPUM_0279___y 301 QMIELLLDQKPLQREHIQLPTRLVTREST 329
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