Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00516 and BPUM_0263

See DNA alignment / Visit BSNT_00516 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:20
# Commandline: needle
#    -asequence pep-align/BSNT_00516___yceF.1.24716.seq
#    -bsequence pep-align/BPUM_0263.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00516___yceF-BPUM_0263.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00516___yceF-BPUM_0263.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00516___yceF
# 2: BPUM_0263
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 259
# Identity:     202/259 (78.0%)
# Similarity:   227/259 (87.6%)
# Gaps:           2/259 ( 0.8%)
# Score: 1059.5
# 
#
#=======================================

BSNT_00516___      1 MDFLHHILSTYASFFDWKMWGEVLTDPVSWGLIGSLVVLEGLLSADNALV     50
                     ||.|.|:|.||||||||.||.||||:||||||||:|||||||||||||||
BPUM_0263          1 MDILKHMLDTYASFFDWHMWAEVLTNPVSWGLIGTLVVLEGLLSADNALV     50

BSNT_00516___     51 LAVMVKHLPEKQRKKALTYGLFGAYIFRFIFIGLGMLLIKFWWIKVLGAL    100
                     |||||||||||||||||||||.|||.|||:|||:|||||||||||||||.
BPUM_0263         51 LAVMVKHLPEKQRKKALTYGLIGAYFFRFLFIGVGMLLIKFWWIKVLGAA    100

BSNT_00516___    101 YLAWLVIKHFWIGEKEEEADGIKKNSWMVRTFGIFWATVISVELMDLAFS    150
                     |||||||||||:|:.::||..:||..||:|.||:|||||||||:||||||
BPUM_0263        101 YLAWLVIKHFWLGDGDDEAKELKKEGWMIRVFGVFWATVISVEIMDLAFS    150

BSNT_00516___    151 VDSILAAFAVSEKVWVLLIGGMLGILMMRTVAKVFLVLIDKIPELENTAF    200
                     ||||||||||||:||:||:|||||||||||||::||||||:|||||||||
BPUM_0263        151 VDSILAAFAVSEEVWILLLGGMLGILMMRTVAQLFLVLIDRIPELENTAF    200

BSNT_00516___    201 VLIGIIALKMAGSAFHYEMPHSVFFIIIIAAFAVTLIIHYINKQK--QVR    248
                     :||||||:||..||.|.|:||..||.|||.||..|.|:|.|||:|  .|.
BPUM_0263        201 ILIGIIAIKMGLSAAHIEIPHLAFFAIIILAFIGTFIVHKINKKKHQDVT    250

BSNT_00516___    249 EQTAASKEE    257
                     .:.||||||
BPUM_0263        251 NEAAASKEE    259


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