Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00492 and BPUM_0255
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:19
# Commandline: needle
# -asequence pep-align/BSNT_00492___ycdA.1.24716.seq
# -bsequence pep-align/BPUM_0255___ycdA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00492___ycdA-BPUM_0255___ycdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00492___ycdA-BPUM_0255___ycdA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00492___ycdA
# 2: BPUM_0255___ycdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 361
# Identity: 190/361 (52.6%)
# Similarity: 257/361 (71.2%)
# Gaps: 10/361 ( 2.8%)
# Score: 974.5
#
#
#=======================================
BSNT_00492___ 1 MRRKNECFRKKTYAVFLILLLMMFTAACSGSKTSAEKKESETEKSSDIAQ 50
.|:||.....|||.:.:..|||||.|..:..||.:| ||.|.|:
BPUM_0255___y 1 ------MFKKKLSLFLLILCVTVVAAACSGGKEKSAAKEKDT-KSLDSAE 43
BSNT_00492___ 51 VKIKDVSYTLPSKYDKSTSDDQLVLKVNVAVKNTGKDPLNVDSMDFTLYQ 100
||::...||||.:||.|..|||.||||||:|||..|:|||||..:|||||
BPUM_0255___y 44 VKVESAEYTLPPQYDTSVQDDQYVLKVNVSVKNISKEPLNVDKSNFTLYQ 93
BSNT_00492___ 101 GDTKMSDTDPEDYSEKLQVSTINADKSVEGNLFFVVDKGKQYELNYTPKS 150
.|:::|...|:||:|.|..|::||.|..:|.|||||||.|.|:|.|....
BPUM_0255___y 94 DDSQVSTISPDDYNEVLSSSSLNAGKVSKGGLFFVVDKEKDYQLVYNEPG 143
BSNT_00492___ 151 YGDKK-PKSVTFKIDGKDKKILTTADKLQDSAKALSAYVDVLLFGKDNAD 199
.|.|| .|::.|.|.||| ::..||.||.||||||:|:||::|||:|.:
BPUM_0255___y 144 SGSKKDDKTLEFDIKGKD--LMKKADTLQASAKALSSYIDVMIFGKNNDE 191
BSNT_00492___ 200 FEKITGANKNEIVNDFNESAKDGYLSASGLSSTYADSKALDNIVNGIKEG 249
|||:||.||:.:||.|::|.|.||:::||:||:.|..:.||.::..:||.
BPUM_0255___y 192 FEKLTGDNKSTVVNQFDKSFKQGYITSSGISSSSAKDENLDKLLKAVKET 241
BSNT_00492___ 250 LSKNSSIQAKTTSISKDEAIVEATVKPVDASSLSDRIEDKVKDYYSKNSS 299
|::.|.:..||.:||.|:|:|..|:.|:|||.|.||:::|..::||||.|
BPUM_0255___y 242 LAEKSKVSTKTKAISGDKAVVTVTLTPIDASPLVDRLKEKATEFYSKNRS 291
BSNT_00492___ 300 ASYEEAVKYALQVYPEEFKKLGPASSEKTVEVKMKKNDIDQWQLDMDDYR 349
|||:||.||.|.:||||||||||:|||:||||.|||||||||:||::||:
BPUM_0255___y 292 ASYDEAQKYLLSIYPEEFKKLGPSSSEETVEVNMKKNDIDQWKLDLNDYK 341
BSNT_00492___ 350 AAELVEAFIKE 360
.:.|||.|||.
BPUM_0255___y 342 TSSLVEKFIKN 352
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