Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00489 and BPUM_0253
See
DNA alignment /
Visit
BSNT_00489 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:19
# Commandline: needle
# -asequence pep-align/BSNT_00489___natB.1.24716.seq
# -bsequence pep-align/BPUM_0253___natB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00489___natB-BPUM_0253___natB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00489___natB-BPUM_0253___natB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00489___natB
# 2: BPUM_0253___natB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 391
# Identity: 194/391 (49.6%)
# Similarity: 285/391 (72.9%)
# Gaps: 5/391 ( 1.3%)
# Score: 1049.0
#
#
#=======================================
BSNT_00489___ 1 MLGHIYKKEMIDALRDRKTILLTILVPMIMMLGLVFFYESMLSDKGEQ-Y 49
|...::||||.||||||||:|||:|:|::.|||||||||||::|.|:: |
BPUM_0253___n 1 MWKTVFKKEMTDALRDRKTLLLTVLIPLLTMLGLVFFYESMIADPGDKAY 50
BSNT_00489___ 50 TLAVGHSLPPALESKLNEIDEISVKTFAKPEEAVDEGKADAYLNVPKEFD 99
|:|:...||..:...:.|:..::::||..|::||.:|:|:|||.:|||..
BPUM_0253___n 51 TVAINEQLPAEMNQMIKEVKNLNLETFDDPQQAVKDGEANAYLEMPKEAG 100
BSNT_00489___ 100 SYVNSMTPFKVDVYGNSIDQGSSNAMQLVQSALDQYKNEIVQQRLTNKHI 149
..:....||.:.::|.:.|..|...:|::||.|:||:|::|::||....|
BPUM_0253___n 101 DMLQHQKPFAIKIHGYTTDDDSVITVQMLQSLLEQYQNQVVEKRLAADQI 150
BSNT_00489___ 150 DQSVIQPFTIQQ---KEADE-EKGTSAIMLSAILPMLILTSIVSGAMPIA 195
|.|||.||.:|. :|.|| |.|.:|::||.:|||:::||::|||:|.|
BPUM_0253___n 151 DTSVIHPFEVQSVDVEEGDEGENGVTAMLLSILLPMILVTSVISGALPAA 200
BSNT_00489___ 196 LDIMAGEKDRKSIEALLLTPVSRNKMLVGKWLAVSTFGVASGVLALVFLI 245
|||:||||||||||||.|||.||.::|:|||||||.||:.||::|:..|:
BPUM_0253___n 201 LDIVAGEKDRKSIEALFLTPASRLQILIGKWLAVSMFGILSGIVAIGMLL 250
BSNT_00489___ 246 LSTVLFTENLKTAFQLGDHMWSVIGASALIIVLSALLISAMELFISIMSS 295
|||:||||.||.|...||.|||:|......:::.:.::|.:||.:|::||
BPUM_0253___n 251 LSTLLFTEKLKQALNFGDQMWSIIAVMFAALIIFSFMVSMIELLLSVVSS 300
BSNT_00489___ 296 SVKEAQSYMSLVVFLPVFPMFFIFSKAPNQFDLSYFLIPFLNLHALFKQL 345
||||||||||:::.|.|.||||.......|.|..||.:||||:|||.|||
BPUM_0253___n 301 SVKEAQSYMSMIITLGVLPMFFTMRAGATQLDTYYFAVPFLNIHALCKQL 350
BSNT_00489___ 346 LFGMVDPAAILSTSGTIAVLIAIFFLLARACFLKDKWVLPK 386
:||::||.|:..|.|:.|:.:.|.|::.|:.|:|:||:|.|
BPUM_0253___n 351 MFGIIDPMAVTLTLGSSALAVVILFVIVRSLFMKEKWMLAK 391
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.