Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00489 and BPUM_0253
See
Amino acid alignment /
Visit
BSNT_00489 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:19
# Commandline: needle
# -asequence dna-align/BSNT_00489___natB.1.24716.seq
# -bsequence dna-align/BPUM_0253___natB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00489___natB-BPUM_0253___natB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00489___natB-BPUM_0253___natB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00489___natB
# 2: BPUM_0253___natB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1282
# Identity: 770/1282 (60.1%)
# Similarity: 770/1282 (60.1%)
# Gaps: 227/1282 (17.7%)
# Score: 1884.0
#
#
#=======================================
BSNT_00489___ 1 ATGCTGG---GCCATATTTATAAAAAAGAAATGATCGACGCTTTGCGCGA 47
||| ||| .||.|||| ||||||||||||||..||.||..||.|.||
BPUM_0253___n 1 ATG-TGGAAAACCGTATT--TAAAAAAGAAATGACAGATGCGCTGAGGGA 47
BSNT_00489___ 48 CAGAAAAACGATTTTACTCACAATCTTAGTGCCGATGATT---------A 88
..|||||||| ||.|||..||.| |||| ||||| |
BPUM_0253___n 48 TCGAAAAACG---TTGCTCTTAACC---GTGC---TGATTCCTCTTTTGA 88
BSNT_00489___ 89 TGATGCTTGGACTTGTCTTCTTTTATGAAAGCATGCTGTCCGACAAAGGG 138
.||||||||||||.||.||||||||||||||||||.|..|.||...||||
BPUM_0253___n 89 CGATGCTTGGACTGGTGTTCTTTTATGAAAGCATGATTGCAGATCCAGGG 138
BSNT_00489___ 139 G----AGC--AGTACACGCTGGCTGTCGGCCATTC--------GCTTCCG 174
| ||| | |||| || .|||| || ||||||.
BPUM_0253___n 139 GATAAAGCCTA-TACA--------GT-TGCCA-TCAATGAACAGCTTCCA 177
BSNT_00489___ 175 CCCGCACTGGAAAGCAA--GCTTAATGAGATTGACGAAA---TCAGCGTA 219
.|||.|.|| ||.||| |.|.||.||| |.|.||| |.|.|.|.
BPUM_0253___n 178 GCCGAAATG--AACCAAATGATCAAAGAG---GTCAAAAACCTAAACCTT 222
BSNT_00489___ 220 AAAACATTT--------GCA--AAGCC-TGAAGAGGCAGTTGATGAAGGA 258
.|||||||| ||| ||||| |.||| ||.||.
BPUM_0253___n 223 GAAACATTTGATGATCCGCAGCAAGCCGTCAAG-----------GATGGG 261
BSNT_00489___ 259 AAAGCAGATGCCTATCT-GAACGTCCCGAAAGA-----GTTCGACTCATA 302
.|.|||.||||.||.|| ||| .|.|||||||| | |.|||
BPUM_0253___n 262 GAGGCAAATGCTTACCTAGAA-ATGCCGAAAGAAGCAGG------TGATA 304
BSNT_00489___ 303 TGTCAACAGCATGACA---CCTT-----TTAAGGTTGATG--TTTACGGC 342
|| |..||||||.|.| |.|| ||||..||.||| |.||||.|
BPUM_0253___n 305 TG-CTTCAGCATCAAAAGCCATTCGCCATTAAAATTCATGGTTATACGAC 353
BSNT_00489___ 343 A-------ATTCAATCGATCAAGGGTCTTCAAATGCTATGCAGCTTGTGC 385
| ||||..| |||||.|| ||||||||| |||
BPUM_0253___n 354 AGATGATGATTCGGT-GATCACGG---TTCAAATGC-----------TGC 388
BSNT_00489___ 386 AGTC--TGCCTTAGATCAGTACAAAAATGAAATTGTGCAGCAACGTTTAA 433
|.|| ||| |.||.||.||..||||..||.|.||..||.|.||||||.
BPUM_0253___n 389 AATCATTGC--TGGAACAATATCAAAACCAAGTAGTCGAGAAGCGTTTAG 436
BSNT_00489___ 434 CAAATAAGCATATTGATCAATCGGTGATCCAGCCGTTTACGA-------- 475
||....|.||.||.|||...||.||.||.||.|||||| ||
BPUM_0253___n 437 CAGCGGATCAAATCGATACGTCCGTTATTCATCCGTTT--GAAGTGCAGT 484
BSNT_00489___ 476 ---TTCA-GCAAAAGGAAGCGGATGA---GGAGAAAGGGACT-TCCGCTA 517
||.| |.|.|| ||||..||||| ||| |||.|||.| .||||
BPUM_0253___n 485 CCGTTGATGTAGAA-GAAGGTGATGAAGGGGA-AAACGGAGTGACCGC-- 530
BSNT_00489___ 518 TTATGCTTTCCGCCATTCTGC--CCATGCTGATT---CTGACTTCCATTG 562
||||||.|...|.|||||.| ||| .||||| .||||.|||.|..
BPUM_0253___n 531 -TATGCTGTTGTCGATTCTCCTTCCA--ATGATTTTGGTGACCTCCGTCA 577
BSNT_00489___ 563 TTTCCGGCGCAATGCCGATC-GCTCTTGATATCATGGCCGGTGAAAAGGA 611
|.||.||.||..|||| |.| ||.||||||||..|.||.||||||||.||
BPUM_0253___n 578 TCTCAGGTGCTTTGCC-AGCTGCGCTTGATATTGTAGCGGGTGAAAAAGA 626
BSNT_00489___ 612 CCGGAAGTCAATCGAGGCGCTGCTATTAACGCCAGTCAGCAGAAACAAAA 661
|||.||.||.||.||.|||.||.|..|.||.||.|..||||||..|.|||
BPUM_0253___n 627 CCGAAAATCCATTGAAGCGTTGTTCCTGACACCTGCAAGCAGACTCCAAA 676
BSNT_00489___ 662 TGCTGGTCGGCAAGTGGCTTGCGGTTTCCACTTTTGGCGTGGCTTCAGGT 711
|.||..||||.||.|||||.||.||.||||..|| ||.|..||.|.||
BPUM_0253___n 677 TTCTCATCGGAAAATGGCTGGCTGTCTCCATGTT---CGGGATTTTAAGT 723
BSNT_00489___ 712 -GTATTG--GCTTTGGTGTTTTTGATTTTGTCCACCGTGTTATTTACCGA 758
|.|||| ||..|.|...|..||.||||.|||||..||.|.|||||.||
BPUM_0253___n 724 GGAATTGTAGCGATCGGCATGCTGCTTTTATCCACACTGCTCTTTACAGA 773
BSNT_00489___ 759 AAATTTGAAAACGGCCTTCCAGC--------TGGGAGATCATATGTGGAG 800
|||..|.||| |.||| |.||.|||||.||||||||
BPUM_0253___n 774 AAAGCTAAAA--------CAAGCACTGAACTTTGGTGATCAAATGTGGAG 815
BSNT_00489___ 801 TGTAATCGGCGCTTCA--------GCCTTAATCATTGTGCTCTCTGCATT 842
..|.||||.|| ||| ||..|.||||| || ||| |.||
BPUM_0253___n 816 CATTATCGCCG--TCATGTTTGCGGCGCTCATCAT----CT-TCT-CCTT 857
BSNT_00489___ 843 GCTGATATCTGCGATGGAGCTTTTCATCAGCATCATGTCCAGCTCGGTAA 892
..||.||||...|||.||.||..|..||||..||.|.||.|||||.||||
BPUM_0253___n 858 CATGGTATCGATGATTGAACTGCTACTCAGTGTCGTTTCAAGCTCAGTAA 907
BSNT_00489___ 893 AAGAAGCGCAAAGTTATATGTCTC----TCGTTGTCTTTCTGCCTGTGTT 938
|||||||.|||...||.||||| | ||.|| .|.||..| ||||.|
BPUM_0253___n 908 AAGAAGCACAATCGTACATGTC-CATGATCATT-ACATTAGG--TGTGCT 953
BSNT_00489___ 939 CCCGATGTTTTTCATCTT--CAGCAAG-GCACCGAACCAATTTGACTTAT 985
|||.|||||.||.|.|.| .||||.| ||..||.|.|.|..| ||.|||
BPUM_0253___n 954 CCCAATGTTCTTTACCATGAGAGCAGGTGCTACGCAGCTAGAT-ACGTAT 1002
BSNT_00489___ 986 CATACTTTCTCATCCCGTTTCTGAACCTGCATGCGTTATTTAAACAGCTT 1035
||||||....||||.||.||.||..|.||.|||.|.|.|||.||..|.
BPUM_0253___n 1003 --TACTTTGCGGTCCCATTCCTTAATATTCACGCGCTTTGTAAGCAATTG 1050
BSNT_00489___ 1036 TTATTCGGGATGGTTGACCC---GGCTGCCATTTTGTCTACGTCAGGAAC 1082
.|.||.||.||..|.||.|| |||.|.||.|.|| ||...|||..|
BPUM_0253___n 1051 ATGTTTGGCATCATCGATCCGATGGCCGTCACTCTG---ACACTAGGCTC 1097
BSNT_00489___ 1083 CATC-GCTGT-GCTGATCGCCATCTTCTTTTTACTAGCCAG-AGCCTGCT 1129
| || |||.| ||.| |||.||||||.|||.|..|.|..|| |||.|| |
BPUM_0253___n 1098 C-TCGGCTCTCGCAG-TCGTCATCTTGTTTGTCATCGTGAGAAGCTTG-T 1144
BSNT_00489___ 1130 TCCTGAAAGACAAATGGGTTCTTCCAAAATAA 1161
|..|||||||.||||||.|.|||.||||||||
BPUM_0253___n 1145 TTATGAAAGAGAAATGGATGCTTGCAAAATAA 1176
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.