Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00484 and BPUM_0250

See DNA alignment / Visit BSNT_00484 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:18
# Commandline: needle
#    -asequence pep-align/BSNT_00484.1.24716.seq
#    -bsequence pep-align/BPUM_0250___yccG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00484-BPUM_0250___yccG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00484-BPUM_0250___yccG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00484
# 2: BPUM_0250___yccG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 327
# Identity:     105/327 (32.1%)
# Similarity:   164/327 (50.2%)
# Gaps:          94/327 (28.7%)
# Score: 530.0
# 
#
#=======================================

BSNT_00484         0 --------------------------------------------------      0
                                                                       
BPUM_0250___y      1 MNAFYLGFRIYALIWLGLAFHAVAEAFLPQSSGVLWLLTFCVIGLYTCFI     50

BSNT_00484         1 ----------------------------------MAQPVLCVIAIFAGCE     16
                                                       .:..::.||.:.|...
BPUM_0250___y     51 YKRFLPHVSGYVMLGAFVLFTCAGLSLFLTQGNGWSSLLVFVIIMTADIL    100

BSNT_00484        17 GLRIGQSALQARLSDQIDKLTQAEQHANQMLIDVRSRNHDTMKHITAIKS     66
                     .|::.|:  :.||:.::.:|..||...|::|:::||::|:|.:|:.|..:
BPUM_0250___y    101 SLKMMQT--ERRLNGRLQELINAESRTNELLLELRSKHHETARHLNAFSA    148

BSNT_00484        67 AQPKADTQAYIQNWADQYSQYDCFLKGENAYIAGVLYDFLEKARASNVSV    116
                     :..:.:.:..||    ||.::..::||||||:|..|:.|.::|...::::
BPUM_0250___y    149 SNEEHEIKDLIQ----QYVKHFPWMKGENAYLASTLHSFFQRAEKEDIAL    194

BSNT_00484       117 SLHMHTPLSSLPFSPADQVSLVGNILENALDSAAEARE---KAEIKLETS    163
                     ||.:..|.||||||.|||||..||:|:||||:|.||::   :..|.:.||
BPUM_0250___y    195 SLDLQAPFSSLPFSKADQVSFTGNLLDNALDAAIEAKQAGKEGSISISTS    244

BSNT_00484       164 LRSGLYVLTCENSTPGMDPKVLDTIYQSFGRSTKNGAHEGMGTYIIQKLV    213
                     :||||:::.|||||.||:..|||.::::||||||.|.|:|||||||.:||
BPUM_0250___y    245 IRSGLFLIHCENSTKGMEKHVLDHLFKNFGRSTKGGDHQGMGTYIIHQLV    294

BSNT_00484       214 KSAFGRLDFTYRHPVFRLEIKIPFQK-    239
                     :.|.|.||||||.|..||.||||... 
BPUM_0250___y    295 EKADGTLDFTYRSPDLRLVIKIPLTMS    321


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