Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00491 and BPUM_0249

See DNA alignment / Visit BSNT_00491 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:19
# Commandline: needle
#    -asequence pep-align/BSNT_00491___yccK.1.24716.seq
#    -bsequence pep-align/BPUM_0249___yccK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00491___yccK-BPUM_0249___yccK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00491___yccK-BPUM_0249___yccK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00491___yccK
# 2: BPUM_0249___yccK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 310
# Identity:     212/310 (68.4%)
# Similarity:   251/310 (81.0%)
# Gaps:          14/310 ( 4.5%)
# Score: 1125.0
# 
#
#=======================================

BSNT_00491___      1 MDQTRTLGKTKLKVKRIGFGANAVGGHNLFPNLHDETGKDLVRTALDGGV     50
                                  :..||.|.||||||||||||.::.|::||.||||.||
BPUM_0249___y      1 -------------MNPIGLGTNAVGGHNLFPNLSEDAGRELVETALDQGV     37

BSNT_00491___     51 NFIDTAFIYGLGRSEELIGEVVQERGVRNELIIATKGAHKEVNGSIELDN    100
                     ||:|:|||||||||||||||::.:||.|..|::|||||||||||.|||||
BPUM_0249___y     38 NFLDSAFIYGLGRSEELIGEIIAKRGGRENLVLATKGAHKEVNGQIELDN     87

BSNT_00491___    101 SREFLRSEVEKSLKRLKTDYIDLYYVHFPDGKT-XAEVAGTLKELKDEGK    149
                     ||:|||.:||.||||||||||||||:|||||:|  .||||||||||||||
BPUM_0249___y     88 SRDFLREQVENSLKRLKTDYIDLYYMHFPDGRTPLEEVAGTLKELKDEGK    137

BSNT_00491___    150 IKAIGASNLDYQQLQEFNADGYLEVFQAEYSLIQRDAEKELLPYCEKQGI    199
                     |:||||||||::|||.||.||||:|.|:||||::|:|||:|||||.:..|
BPUM_0249___y    138 IRAIGASNLDFEQLQAFNRDGYLDVLQSEYSLLKREAEKDLLPYCVEHRI    187

BSNT_00491___    200 SFIPYFPLASGLLTGKFTQDTVFDDFRKDKPQFQGETFIHNLKKVDKLKA    249
                     ||||||||||||||||||:|..|||.|...|.||||.|:.||:|||||||
BPUM_0249___y    188 SFIPYFPLASGLLTGKFTKDATFDDIRAKDPLFQGEAFLQNLEKVDKLKA    237

BSNT_00491___    250 VAEEKQADTAHVALAWLLTRPAIDAIIPGAKRPEQLQDNLKTLNIELTED    299
                     :|:.|.|:||||||||||.:..||||||||||.||:|.||||..::||::
BPUM_0249___y    238 IAQSKNAETAHVALAWLLAQDGIDAIIPGAKRAEQVQQNLKTNEVQLTKE    287

BSNT_00491___    300 EVNFISDIFK    309
                     |:|.|..||.
BPUM_0249___y    288 EINQIDHIFS    297


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.