Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01429 and BPUM_0242

See DNA alignment / Visit BSNT_01429 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:00
# Commandline: needle
#    -asequence pep-align/BSNT_01429___yfhM.1.24716.seq
#    -bsequence pep-align/BPUM_0242___yfhM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01429___yfhM-BPUM_0242___yfhM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01429___yfhM-BPUM_0242___yfhM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01429___yfhM
# 2: BPUM_0242___yfhM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 289
# Identity:     200/289 (69.2%)
# Similarity:   240/289 (83.0%)
# Gaps:           6/289 ( 2.1%)
# Score: 1108.5
# 
#
#=======================================

BSNT_01429___      1 MDGVKCQFVNTNGITLHVAAAGPEDGPLIVLLHGFPEFWYGWKNQIKPLV     50
                     |:.::.|.:.|||:|||.|.||||||||::||||||||||||||||.||.
BPUM_0242___y      1 MEQIEFQSIQTNGVTLHTAMAGPEDGPLLILLHGFPEFWYGWKNQIMPLA     50

BSNT_01429___     51 DAGYRVIAPDQRGYNLSDKPEGIDSYRIDTLRDDIIGLI-TQFTDEKAIV     99
                     :|||||:.||||||:||||||||:||.:|.|||||:||| |...::||||
BPUM_0242___y     51 EAGYRVVVPDQRGYHLSDKPEGIESYVLDQLRDDIVGLIKTLSGNQKAIV    100

BSNT_01429___    100 IGHDWGGAVAWHLASTRPEYLEKLIAINIPHPHVMKTVTPLYPPQWLKSS    149
                     .||||||||||||||||.:|:||||.:|:|||.||..|.|.|||||.|||
BPUM_0242___y    101 GGHDWGGAVAWHLASTRSQYVEKLIIVNMPHPRVMMKVLPFYPPQWKKSS    150

BSNT_01429___    150 YIAYFQLPDIPEASLRENDYETLDKAIGLSDRPALFTSEDVSRYKEAWKQ    199
                     |||:||||::||.:|:||.::.||:||||:.||.|||.||||.||.||.|
BPUM_0242___y    151 YIAFFQLPNVPEVALQENHFQKLDEAIGLTARPHLFTKEDVSSYKLAWTQ    200

BSNT_01429___    200 PGALTAMLNWYRALRKGSLAEKPSYE--TVPYRMIWGMEDRFLSRKLAKE    247
                     |||:|:|||||||::||.. |||..:  .||.||||||||::||||||||
BPUM_0242___y    201 PGAMTSMLNWYRAIKKGGF-EKPISKRILVPVRMIWGMEDKYLSRKLAKE    249

BSNT_01429___    248 TERHCPNGHLIFVDEASHWINHEKPAIVNQLILEYLKNQ    286
                     |.:.||||.|||||:||||||||||.:||:||||:|.  
BPUM_0242___y    250 TMKICPNGQLIFVDDASHWINHEKPEVVNKLILEFLN--    286


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