Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06132 and BPUM_0235
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:37
# Commandline: needle
# -asequence pep-align/BSNT_06132___yxaF.1.24716.seq
# -bsequence pep-align/BPUM_0235___yxaF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06132___yxaF-BPUM_0235___yxaF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06132___yxaF-BPUM_0235___yxaF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06132___yxaF
# 2: BPUM_0235___yxaF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 75/200 (37.5%)
# Similarity: 116/200 (58.0%)
# Gaps: 22/200 (11.0%)
# Score: 369.0
#
#
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BSNT_06132___ 1 MTSRGDSREKILHTASRLFQLQGYHATGLNQIVKESGAPKGSLYHFFPNG 50
..::::|:.||:.|.:.|||||||||||::|||.||||||::||||
BPUM_0235___y 1 ----MSTKDRIIQTAALLLRKQGYHATGLNQIIRESGTPKGSLYYYFPNG 46
BSNT_06132___ 51 KEELAIEAVTYTGKIVEHLIQQSMDESSDPTEAIQLFIKKTASQFDNTES 100
||||||.||.|..:.|.:.|::|...|.||..||:.|:......|...|:
BPUM_0235___y 47 KEELAIAAVEYISQKVINRIEESFAYSDDPYLAIECFMTNIIRGFTEQEN 96
BSNT_06132___ 101 IKGIPVGLLASETALISEPLRTVCMKVFKSWEAVFARKLMENGFADEEAN 150
.:|||:.|||:|:......|.|.|.:....|:.:...|||.:|:.:.:|:
BPUM_0235___y 97 ERGIPIVLLAAESKPEHTQLHTACKQEMIRWQKLVKEKLMNSGYEENKAD 146
BSNT_06132___ 151 QLGTLINSMIEGGIMLSLTNKDKTPL---------LLIAEQIPVLVRKKG 191
:|.:|::||:.||:.::...|..||| |.:.::
BPUM_0235___y 147 ELASLLHSMVIGGLSMTTALKQTTPLEHVKCYLRHLFMRDE--------- 187
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