Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05872 and BPUM_0233
See
DNA alignment /
Visit
BSNT_05872 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:27
# Commandline: needle
# -asequence pep-align/BSNT_05872___epr.1.24716.seq
# -bsequence pep-align/BPUM_0233___epr.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05872___epr-BPUM_0233___epr.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05872___epr-BPUM_0233___epr.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05872___epr
# 2: BPUM_0233___epr
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 697
# Identity: 293/697 (42.0%)
# Similarity: 380/697 (54.5%)
# Gaps: 166/697 (23.8%)
# Score: 1337.5
#
#
#=======================================
BSNT_05872___ 1 ------MKNMSCKLVVSVTLFFSFLTIGPLAHAQNSS---EKEVIVVYKN 41
:|. |:||.:....:..|..|. |:|.:: |.:||:||||
BPUM_0233___e 1 MQGAIALKK---KIVVVMAFLLALSTALPY-HSQAAAPPKETDVIIVYKN 46
BSNT_05872___ 42 KAGKETILDSDADVEQQYKHLPAVAVTADQETVKELKQDPDILYVENNVS 91
:.||:|.::....|..||.||||||||||::.|..|||||:|.||..|:.
BPUM_0233___e 47 QKGKQTAIEESEKVNAQYIHLPAVAVTADEQAVTSLKQDPNIAYVSKNIK 96
BSNT_05872___ 92 FTAADSTDFKVLSDGTDTSDNF---EQWNLEPIQVKQAWKAGLTGKNIKI 138
...|.|| :......|..|| :.:||:.:.||||.|.|:||||:|:
BPUM_0233___e 97 VKLASST---MKQTAAATGQNFLVQQSYNLQKLNVKQAIKEGVTGKNVKV 143
BSNT_05872___ 139 AVIDSGISPHDDLSIAGGYSAVSYTSSYKDDNGHGTHVAGIIGAKHNGYG 188
|::|:|||||:||.::||.|.|.||:|||||.||||||||.|||.:|.||
BPUM_0233___e 144 AILDTGISPHEDLKVSGGKSFVKYTTSYKDDQGHGTHVAGTIGALNNDYG 193
BSNT_05872___ 189 IDGIAPEAQIYAVKALDQNGSGDLQSLLQGIDWSIANGMDIVNMSLGTTS 238
..|:|..|::||||.||:.|.|||.|||:||||:|:|.|||:|:|||...
BPUM_0233___e 194 TVGVASGAKLYAVKVLDKKGEGDLYSLLRGIDWAISNKMDIMNLSLGFED 243
BSNT_05872___ 239 DSKILHDAVNKAYEQGVLLVAASGNDGNGKPVNYPAAYSSVVAVSATNEK 288
:..||..||::||::|:|:||||||||....::|||||:||:||||||||
BPUM_0233___e 244 NIPILRSAVDEAYKKGLLVVAASGNDGKKNFISYPAAYNSVIAVSATNEK 293
BSNT_05872___ 289 NQLASFSTTGDEVEFSAPGTNITSTYLNQYYATGSGTSQATPHAAAMFAL 338
::|.|.|.||..:||||||..:.||||...|...:|||||.||...|.||
BPUM_0233___e 294 DKLVSLSNTGKGIEFSAPGEKVISTYLKNEYWYATGTSQAAPHVTGMLAL 343
BSNT_05872___ 339 LKQRDPAETNVQLREEMRRNIVDLGTAGRDQQFGYGLIQYKAQATDSAYA 388
|||..|.:||||||..:|...||||..|:|.|||||.:||..|: |...
BPUM_0233___e 344 LKQLHPKKTNVQLRTLLRSYTVDLGAKGKDPQFGYGRVQYIPQS--SFLK 391
BSNT_05872___ 389 AAEQAVKKAEQTKAQTDINKAQELVSQLPGSDAKTALQKRLDKVQSYRNV 438
.|..|||.||.:|.|.|:|:|:..:.:|..|..||||.:|:.|||...::
BPUM_0233___e 392 TATSAVKTAETSKKQADVNQAKTRIGRLTASKQKTALTERVKKVQGTIDI 441
BSNT_05872___ 439 KDAKDKVANAEKYKTQQTVDTAQTAINKLPNGTDKKNLQKRLDQVKRYIA 488
:.|:.||..|||.|||..:.:|||||
BPUM_0233___e 442 RSARAKVQTAEKSKTQGAIKSAQTAI------------------------ 467
BSNT_05872___ 489 SKQAKDKVAKAEKSKKKTDVDSAQSAIGKLPASSEKTSLQKRLNKVKSTN 538
|:|||
BPUM_0233___e 468 ----------------------------------------KKLNK----- 472
BSNT_05872___ 539 LKTAQQSVSAAEKKSTDANAAKAQSAVNQLQAGKDKTALQKRLDKVKKKV 588
||:||:||.|||||||::
BPUM_0233___e 473 --------------------------------GKEKTSLQNRLDKVKKQL 490
BSNT_05872___ 589 AAAEAKKVETAKAKVKKAEKDKTKKSKASAQSAVNQLKASNEKTKLQKRL 638
|..|||..||.||||||..:|||:||:||:||.|||||..||.|||||
BPUM_0233___e 491 --AYQKKVTDAKQKVKKAEAKRTKKTKAAAQTAVKQLKASKTKTSLQKRL 538
BSNT_05872___ 639 NAVKPKSNQKPLRLAFQVLKVFYILRTSHTTFFPSIVQAFHTIAIQP 685
|.:|.
BPUM_0233___e 539 NRIKV------------------------------------------ 543
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.