Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00981 and BPUM_0229

See DNA alignment / Visit BSNT_00981 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:39
# Commandline: needle
#    -asequence pep-align/BSNT_00981___ydgK.1.24716.seq
#    -bsequence pep-align/BPUM_0229___tcaB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00981___ydgK-BPUM_0229___tcaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00981___ydgK-BPUM_0229___tcaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00981___ydgK
# 2: BPUM_0229___tcaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 411
# Identity:     176/411 (42.8%)
# Similarity:   248/411 (60.3%)
# Gaps:          15/411 ( 3.6%)
# Score: 800.0
# 
#
#=======================================

BSNT_00981___      1 --MLHNP--TGKERLALAFLLGMLAILGPLNIDMYLPSFPEIAEDLSASA     46
                       .|..|  :.|.|..||.|||.|..|.||.:|||||:.|.||.|..||.
BPUM_0229___t      1 MSSLSYPQESKKNRFLLAALLGSLTALAPLAMDMYLPALPHIARDFEAST     50

BSNT_00981___     47 SLVQLSLTACLVGLTIGQLIVGPVSDAQGRRKPLLICIFLFALSSLFCAL     96
                     :|.||||.|||:||.:||||.||:||..||||||:|.:.:|..:||.|.:
BPUM_0229___t     51 ALSQLSLMACLIGLALGQLIAGPISDTVGRRKPLMIGLIIFIAASLLCTV    100

BSNT_00981___     97 SPNITTLVAARFLQGFTASAGLVLSRAIVRDVFTGRELSKFFSLLMVITA    146
                     ..:|...:..|.:||...|||:|::||||||.:.|.|::|||:|||::..
BPUM_0229___t    101 VSSIWMFILLRLIQGLAGSAGIVIARAIVRDHYEGSEMTKFFALLMLVNG    150

BSNT_00981___    147 VAPMVAPMTGGAILLLPFATWHTIFHVLMIIGFLLVLLIALRLKETLPPE    196
                     |||..||:.||.  :|.|.||..:|.:|.|:|.|::|.....|:|:||.|
BPUM_0229___t    151 VAPAAAPIVGGQ--MLRFTTWQGVFVLLGILGTLMLLRSIFSLQESLPAE    198

BSNT_00981___    197 KRIPSSIGTSVKTMGSLLKDRSFMGYALTVGFIHGGSFAYVSGTPFVYQD    246
                     :|........|..|..|..||.|:||||:.|.:....|||:||:|||.|:
BPUM_0229___t    199 RRQTGGFQQIVSAMKILASDRLFVGYALSQGLVFAAMFAYISGSPFVLQE    248

BSNT_00981___    247 IYGVSPQVFSILFGINGLAIISGSFIIGRFGGIIHEKSLLRIAVITAMIA    296
                     ::.:|||.||..|.:|.|.||:......|....|.|:.:|||.::.|.:.
BPUM_0229___t    249 LFHLSPQGFSAAFAVNSLGIITAGQEFARVAAKIGEEKVLRIGLLIATLG    298

BSNT_00981___    297 TAVLLTMTMIHGPLATLVISIFIYMITIGMVLTSTFTLAMEKQGHRAGSA    346
                     ...|..|..|...|..::|.:|..:.::|:|.||..:|||:..|..||||
BPUM_0229___t    299 GVTLFLMISIDAGLYGILIPLFFVVSSVGIVGTSAPSLAMQHHGAHAGSA    348

BSNT_00981___    347 SALLGMLPLLLGSIVSPLVGI-NETTAVPMGAIMFVTAVIGSLA---FFG    392
                     :||:|:..:|||:.|:||||: ...||.|||.|:.: ..:|:|.   ||.
BPUM_0229___t    349 AALIGVAQMLLGACVTPLVGLAGSQTAFPMGLIIML-CELGALCCYFFFV    397

BSNT_00981___    393 L-TKERVGQNS    402
                     : .|:|..   
BPUM_0229___t    398 VRAKKRPA---    405


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