Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00427 and BPUM_0224

See DNA alignment / Visit BSNT_00427 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:17
# Commandline: needle
#    -asequence pep-align/BSNT_00427___mmuM.1.24716.seq
#    -bsequence pep-align/BPUM_0224___mmuM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00427___mmuM-BPUM_0224___mmuM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00427___mmuM-BPUM_0224___mmuM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00427___mmuM
# 2: BPUM_0224___mmuM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity:     194/318 (61.0%)
# Similarity:   242/318 (76.1%)
# Gaps:           9/318 ( 2.8%)
# Score: 1031.5
# 
#
#=======================================

BSNT_00427___      1 MNPIQHILDTYPLIVLDGAMATELERKGCNLNDSLWSAKILMEEPNLIKQ     50
                     |||||..|..:..::||||:|||||||||||||||||||||:|:|.||:|
BPUM_0224___m      1 MNPIQSRLQAHAPLILDGALATELERKGCNLNDSLWSAKILIEQPELIQQ     50

BSNT_00427___     51 VHTDYFAAGADCAITASYQSTFEGFAARGLSEAEARRLIELSVSIAAEAR    100
                     ||.|||.||||||.|||||:|.:|||.:|.|:.||..|::.||::|.|||
BPUM_0224___m     51 VHLDYFQAGADCATTASYQTTIDGFAEKGYSKEEAIELMKRSVTLAKEAR    100

BSNT_00427___    101 DEFWSLEENRLNRPKPIIAASVGPYGAYLADGSEYRGNYAISEDELIEFH    150
                     |.||..|.:|..|.||.:|.||||:||||:|||||:|||.::|..||:||
BPUM_0224___m    101 DLFWQDEASRNGRTKPFVAGSVGPFGAYLSDGSEYKGNYGLTEQALIDFH    150

BSNT_00427___    151 RPRMKALIEAGADVLACETIPCLTEAKAIVRLLK-EFPETYAWISFSAKD    199
                     |||::||:|||||:|||||||||.||.||.:||: ||....|||:|||||
BPUM_0224___m    151 RPRIQALVEAGADILACETIPCLIEAIAIAKLLQDEFSGVSAWITFSAKD    200

BSNT_00427___    200 GLHISDGTPAADCASWLDEHRQIAALGINCTPLQHIPSLIEELKKNTSKP    249
                     .||||:|....:|...|:.:.||||:|:||||.|:|.|||:|:||.||||
BPUM_0224___m    201 DLHISEGDLLRECVQALEPYEQIAAVGVNCTPPQYISSLIQEMKKGTSKP    250

BSNT_00427___    250 IIVYPNSGEQYDPETKTWNGAACAESYGASARTWHEKGARLIGGCCRTKP    299
                     |:|||||||.||||.|.|:|.....::|..|..|::.||.:|||||||.|
BPUM_0224___m    251 IVVYPNSGELYDPEDKVWSGDTPQHTFGECAHQWYQDGAHIIGGCCRTTP    300

BSNT_00427___    300 ENIQEIAAWARSLKTT--    315
                     |:|.:|      ||.|  
BPUM_0224___m    301 EDITDI------LKLTTS    312


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