Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00325 and BPUM_0202

See DNA alignment / Visit BSNT_00325 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:15
# Commandline: needle
#    -asequence pep-align/BSNT_00325___ybbK.1.24716.seq
#    -bsequence pep-align/BPUM_0202.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00325___ybbK-BPUM_0202.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00325___ybbK-BPUM_0202.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00325___ybbK
# 2: BPUM_0202
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 155
# Identity:      87/155 (56.1%)
# Similarity:   107/155 (69.0%)
# Gaps:           6/155 ( 3.9%)
# Score: 438.5
# 
#
#=======================================

BSNT_00325___      1 MILVSSCLGGIECRYNGSHAASEKIRKLVDEKKAVMACPELLGGFSTPRE     50
                     ||:||:||.|::.||||||...::|.:.|.|.|||..||||||||||||.
BPUM_0202          1 MIVVSACLAGLKVRYNGSHRLDQRIEEFVQEGKAVTVCPELLGGFSTPRP     50

BSNT_00325___     51 PAEIIGGTGEDVLNGTAKIVTASGEDVTELYMEGAAKTLAYAKEINASAV    100
                     |||||||.|.|||.|.|.:|...|.||||:|::||..||...:.:.|:||
BPUM_0202         51 PAEIIGGDGHDVLRGQATVVDVHGTDVTEMYVKGAKATLEQVQSLKATAV    100

BSNT_00325___    101 ILKENSPSCGSGFIYNGTFSGKKITGSGVTAALLKQAGYRVISENELNDI    150
                     :|||.||||||..||.|.|:||...|.|||:|||||.|.:|.||.:  |.
BPUM_0202        101 VLKEYSPSCGSRMIYQGEFNGKTKAGDGVTSALLKQHGIQVFSEED--DW    148

BSNT_00325___    151 L----    151
                     :    
BPUM_0202        149 ISLFQ    153


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