Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01784 and BPUM_0200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:17
# Commandline: needle
# -asequence pep-align/BSNT_01784___yhjH.1.24716.seq
# -bsequence pep-align/BPUM_0200.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01784___yhjH-BPUM_0200.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01784___yhjH-BPUM_0200.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01784___yhjH
# 2: BPUM_0200
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 187
# Identity: 41/187 (21.9%)
# Similarity: 75/187 (40.1%)
# Gaps: 47/187 (25.1%)
# Score: 150.0
#
#
#=======================================
BSNT_01784___ 1 MNTDHTKRNLFELYAELIHQQEKWEGLIKA----FLSDELRKLD------ 40
.:.|.:.::|| .:..|.|:.|
BPUM_0200 1 -------------------METKEQIVLKAIQDLIIHREKRRNDPTDPLI 31
BSNT_01784___ 41 -VEHGSKSQLTMTEIHVLSCVGDN-EPINVTSIAEKMNTTKATVSRISTK 88
.....|...|:|::|:||.:..| ...|.|.:::::..:|..:::...|
BPUM_0200 32 TTTDTLKQDWTLTQLHILSMIQANPNESNNTFLSQQLKLSKPAITKAVKK 81
BSNT_01784___ 89 LLGAGFLHRTQLSDNKKEVYFRLTPAGKKLHSLHKYYHQKAEQRFLSFFD 138
|:..|.:.......:||.||:.||..|.:|.:||...|:||...:|.|..
BPUM_0200 82 LIDKGMVDYCHRQGDKKSVYYSLTEKGTQLAALHDELHEKAVASYLEFLQ 131
BSNT_01784___ 139 RYTEEEILFAERLFRDLVTKWYPSSEEIEGGLPSIFK 175
::.|:|:...||..: .| .|:|
BPUM_0200 132 QFHEDELQVIERFLK----AW---KEKI--------- 152
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