Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00376 and BPUM_0181

See DNA alignment / Visit BSNT_00376 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:16
# Commandline: needle
#    -asequence pep-align/BSNT_00376___glpQ.1.24716.seq
#    -bsequence pep-align/BPUM_0181.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00376___glpQ-BPUM_0181.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00376___glpQ-BPUM_0181.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00376___glpQ
# 2: BPUM_0181
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 293
# Identity:     192/293 (65.5%)
# Similarity:   236/293 (80.5%)
# Gaps:           0/293 ( 0.0%)
# Score: 1008.0
# 
#
#=======================================

BSNT_00376___      1 MRKNRILALFVLSLGLLSFMVTPVSAASKGNLLSPDRILTVAHRGASGYV     50
                     |:|:|:||..:||..|||....|.:.::..:||||||||||||||||||.
BPUM_0181          1 MKKSRLLAFVLLSFALLSIAWVPATVSAHEHLLSPDRILTVAHRGASGYA     50

BSNT_00376___     51 PEHTILSYETAQKMKADYIELDLQMTKDGKLIVMHDEKLDRTTNGMGWVK    100
                     ||||:.||:.|.||.|||:||||||||||.|||||||.:||||||.|.||
BPUM_0181         51 PEHTLASYKLATKMNADYLELDLQMTKDGHLIVMHDETVDRTTNGTGSVK    100

BSNT_00376___    101 DHTLADIKKLDAGSWFNEAYPEKAKPQYVGLKVPTLEEVLDRFGKHANYY    150
                     |.|||:||:||||:|||||.|::....|:|.:|.||:|||..|||..|||
BPUM_0181        101 DLTLAEIKQLDAGTWFNEANPDRQNANYIGQRVLTLDEVLRYFGKRENYY    150

BSNT_00376___    151 IETKSPDTYPGMEEKLIASLQKHKLLGKHSKPGQVIIQSFSKESLVKVHQ    200
                     ||||.||.||.|||||:|:|:||.|||||:|.|||||||||::||:|:.:
BPUM_0181        151 IETKKPDIYPQMEEKLLATLKKHHLLGKHTKKGQVIIQSFSQDSLLKLQK    200

BSNT_00376___    201 LQPNLPTVQLLEAKQMASMTDAALEEIKTYAVGAGPDYKALNQENVRMIR    250
                     |.|.||.||||:..||.|:||..|:.||:||||.||:::||..|||:.:|
BPUM_0181        201 LAPRLPKVQLLDRTQMTSITDDQLDFIKSYAVGVGPNFRALTLENVQQVR    250

BSNT_00376___    251 SHGLLLHPYTVNNEADMHRLLDWGVTGVFTNYPDLFHKVKKGY    293
                     |||||||||||||||||.|||.:||||:|||:||:|::||...
BPUM_0181        251 SHGLLLHPYTVNNEADMTRLLQYGVTGLFTNFPDVFNRVKASI    293


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